5OQLE

Cryo-em structure of the 90s pre-ribosome from chaetomium thermophilum
Knot K +31
Knot core rangeKnot core lengthKnot tails rangeSlipknot tails rangeSlipknot loops rangeN-end lengthC-end lengthType
view details
+31 156-201 46 1-155, 202-229 155 28 knot
Chain Sequence
HVPIPPNDKDTKRLIVVLSNASLETYK--------------YTLLNSDEHIGIMRKMNRDISDARPDITHQCLLTLLDSPINKAGKLQIYIQTAKGVLIEVSPTVRIPRTFKRFAGLMVQLLHRLSIKGTNTNEKLLKVIQNPITDHLPPNCRKVTLSFDAPLVRVRDYVDTLGPNESICVFVGAMAKGPDNFADAYVDEKISISNYSLSASVACSKFCHACEDAWDII
sequence length 229
structure length 215
publication title 3.2- Angstrom -resolution structure of the 90S preribosome before A1 pre-rRNA cleavage.
pubmed doi rcsb
molecule tags Ribosome
molecule keywords Periodic tryptophan protein 2-like protein
missing residues 28-41
ec nomenclature
pdb deposition date2017-08-12
KnotProt deposition date2017-10-11
Image from the rcsb pdb (www.rcsb.org)
5FAIA 3OIIA 3OINA 2V3KA 2V3JA 3OIJA 5OQLe 5JPQe
similar chains in the KnotProt database (40% sequence similarity)
3OIIB 3OINB 3OIJB 5OQLf 5WLCSJ 5WLCSK 5WYJE1 5WYJE2 5WYKE1 5WYKE2 5TZSj 5TZSk 5JPQf
similar chains in the pdb database (40% sequence similarity)

 
            
               
#similar chains in the KnotProt database (40% sequence similarity)
 5FAI A;  3OII A;  3OIN A;  2V3K A;  2V3J A;  3OIJ A;  5OQL e;  5JPQ e; 
               
               
           
#similar chains in the pdb database (40% sequence similarity)
 3OII B;  3OIN B;  3OIJ B;  5OQL f;  5WLC SJ;  5WLC SK;  5WYJ E1;  5WYJ E2;  5WYK E1;  5WYK E2;  5TZS j;  5TZS k;  5JPQ f; 
           

KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling