| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
41 | 38-276 | 239 | 1-37, 277-735 | 37 | 459 | knot |
Chain Sequence |
GAMARDPLPFFPPLYLGGPEITTENCEREPIHIPGSIQPHGALLTADGHSGEVLQMSLNAATFLGQEPTVLRGQTLAALLPEQWPALQAALPPGCPDALQYRATLDWPAAGHLSLTVHRVGELLILEFEPTEAWDSTGPHALRNAMFALESAPNLRALAEVATQTVRELTGFDRVMLYKFAPDATGEVIAEARREGLHAFLGHRFPASDIPAQARALYTRHLLRLTADTRAAAVPLDPVLNPQTNAPTPLGGAVLRATSPMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLEYLGRLLSLQVQVKEAADVAAFRQSLREHHARVALAAAHSLSPHDTLSDPALDLLGLMRAGGLILRFEGRWQTLGEVPPAPAVDALLAWLETQPGALVQTDALGQLWPA-----PSAAGLLAISVGEGWSECLVWLRPELRLEVAWGGATPDQAKDDLGPRHSFDTYLEEKRGYAEPWHPGEIEEAQDLRDTLTGALGERLSVIRVRNTFGRYLTDQVVATLLENPEGLKMGGDRRPITILTSDLRGFTSTSEGLNPEEVVKVLNIYFGKMADVITHHGGTIDKFMGDGILVLFGAPTSQQDDALRAVACGVEMQLALREVNQQVTGLGLQPLEMGIGINTGEVVVGNIGSEKRTKYGVVGAQVNLTYRIESYTTGGQIFISSTTLEAAGDRVHVNGNRTVQPKGVKDPVVIWDVAGVGEPYNLSLAV
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
|
 |
4.1 | 36-467 | 432 | 1-35, 468-730 | 35 | 263 | knot | |||
| view details |
 |
3.2m | 34-270 | 237 | 1-33 | 281-730 | 271-280 | 33 | 450 | slipknot | ||
| view details |
|
4.1 | 13-280 | 268 | 1-12 | 287-730 | 281-286 | 12 | 444 | slipknot | ||
| view details |
|
4.1 | 34-282 | 249 | 1-33 | 292-730 | 283-291 | 33 | 439 | slipknot | ||
| view details |
|
4.1 | 34-291 | 258 | 1-33 | 294-730 | 292-293 | 33 | 437 | slipknot | ||
| view details |
|
3.2m | 35-295 | 261 | 1-34 | 319-730 | 296-318 | 34 | 412 | slipknot | ||
| view details |
|
4.1 | 36-312 | 277 | 1-35 | 468-730 | 313-467 | 35 | 263 | slipknot | ||
| view details |
|
3.2m | 18-280 | 263 | 1-12, 283-730 | 13-17, 281-282 | 12 | 448 | slipknot | |||
| view details |
|
3.2m | 26-280 | 255 | 1-17, 283-730 | 18-25, 281-282 | 17 | 448 | slipknot | |||
| view details |
 |
3.2 | 39-317 | 279 | 1-35, 406-730 | 36-38, 318-405 | 35 | 325 | slipknot | |||
| view details |
|
3.2 | 39-405 | 367 | 1-35, 719-730 | 36-38, 406-718 | 35 | 12 | slipknot | |||
| view details |
|
|
4.1 | 39-718 | 680 | 719-730 | 1-35 | 36-38 | 35 | 11 | slipknot |
| sequence length |
735
|
| structure length |
730
|
| publication title |
Structure-guided design and functional characterization of an artificial red light-regulated guanylate/adenylate cyclase for optogenetic applications
rcsb |
| molecule tags |
Lyase
|
| molecule keywords |
Bacteriophytochrome,Adenylate cyclase
|
| source organism |
Deinococcus radiodurans
|
| missing residues |
417-421
|
| total genus |
 Genus: 218
|
| ec nomenclature | |
| pdb deposition date | 2018-01-15 |
| KnotProt deposition date | 2018-04-19 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
