Found 17 chains in Knotoided chains table. Displaying 1 - 17. Applied filters: Probabilistic

Search results query: topological notation for knotoids: S 4.1, 3.2m, 3.2, 2.1, 1.1

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#pdbid|chain|deposition date|is S/K-not|(slip)knot types;
      
  5nva|A|2018-06-12|S|4.1 3.2- 3.2 2.1 1.1;
  4hod|A|2018-06-11|S|4.1 3.2- 3.2 2.1 1.1;
  6awo|A|2018-06-11|S|4.1 3.2- 3.2 2.1 1.1;
  5jag|A|2018-06-11|S|4.1 3.2- 3.2 2.1 1.1;
  5jae|A|2018-06-11|S|4.1 3.2- 3.2 2.1 1.1;
  4xp5|A|2018-06-11|S|4.1 3.2- 3.2 2.1 1.1;
  4mmc|A|2018-06-11|S|4.1 3.2- 3.2 2.1 1.1;
  4mm4|A|2018-06-11|S|4.1 3.2- 3.2 2.1 1.1;
  4m48|A|2018-06-11|S|4.1 3.2- 3.2 2.1 1.1;
  2xq2|A|2018-06-11|S|4.1 3.2- 3.2 2.1 1.1;
  4dji|A|2018-06-11|S|4.1 3.2- 3.2 2.1 1.1;
  3usl|A|2018-06-11|S|4.1 3.2- 3.2 2.1 1.1;
  3qs4|A|2018-06-11|S|4.1 3.2- 3.2 2.1 1.1;
  3mpq|A|2018-06-11|S|4.1 3.2- 3.2 2.1 1.1;
  3l1l|A|2018-06-11|S|4.1 3.2- 3.2 2.1 1.1;
  3f3d|A|2018-06-11|S|4.1 3.2- 3.2 2.1 1.1;
  3dh4|A|2018-06-11|S|4.1 3.2- 3.2 2.1 1.1;
Knotoid types pdb Title
S 4.1, 3.2m, 3.2, 2.1, 1.1
2
5nvaA Substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site
S 4.1, 3.2m, 3.2, 2.1, 1.1
16
4hodA Crystal structure of leut-e290s with bound cl
S 4.1, 3.2m, 3.2, 2.1, 1.1 6awoA X-ray structure of the ts3 human serotonin transporter complexed with sertraline at the central site
S 4.1, 3.2m, 3.2, 2.1, 1.1
15
5jagA Leut t354h mutant in the outward-oriented, na+-free return state
S 4.1, 3.2m, 3.2, 2.1, 1.1
16
5jaeA Leut in the outward-oriented, na+-free return state, p21 form at ph 6.5
S 4.1, 3.2m, 3.2, 2.1, 1.1 4xp5A X-ray structure of drosophila dopamine transporter bound to cocaine analogue-rti55
S 4.1, 3.2m, 3.2, 2.1, 1.1
14
4mmcA Crystal structure of leubat (delta6 mutant) in complex with desvenlafaxine
S 4.1, 3.2m, 3.2, 2.1, 1.1
19
4mm4A Crystal structure of leubat (delta13 mutant) in complex with paroxetine
S 4.1, 3.2m, 3.2, 2.1, 1.1 4m48A X-ray structure of dopamine transporter elucidates antidepressant mechanism
S 4.1, 3.2m, 3.2, 2.1, 1.1
23
2xq2A Structure of the k294a mutant of vsglt
S 4.1, 3.2m, 3.2, 2.1, 1.1
20
4djiA Structure of glutamate-gaba antiporter gadc
S 4.1, 3.2m, 3.2, 2.1, 1.1
20
3uslA Crystal structure of leut bound to l-selenomethionine in space group c2 from lipid bicelles
S 4.1, 3.2m, 3.2, 2.1, 1.1
18
3qs4A Crystal structure of leut mutant f259v bound to sodium and l-tryptophan
S 4.1, 3.2m, 3.2, 2.1, 1.1
16
3mpqA I204r1 mutant of leut
S 4.1, 3.2m, 3.2, 2.1, 1.1
15
3l1lA Structure of arg-bound escherichia coli adic
S 4.1, 3.2m, 3.2, 2.1, 1.1
17
3f3dA Crystal structure of leut bound to l-methionine and sodium
S 4.1, 3.2m, 3.2, 2.1, 1.1
25
3dh4A Crystal structure of sodium/sugar symporter with bound galactose from vibrio parahaemolyticus
How to cite
KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling