KnotProt 2.0: A database of proteins with knots and slipknots

Found 8 chains in Knotoided chains table. Displaying 1 - 8. Applied filters: Probabilistic

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Knots
Knotoids

Search results query: topological notation for knotoids with Artifacts: K 3.1m

#pdbid|chain|deposition date|is S/K-not|(slip)knot types;
      
  6s4q|A|2019-10-18|K|3.1-;
  6rao|I|2019-09-10|K|3.1-;
  4ye9|A|2018-09-12|K|3.1-;
  3gbn|L|2018-06-11|K|3.1-;
  3iyk|A|2018-06-11|K|3.1-;
  3m9s|M|2018-06-11|K|3.1-;
  3m9c|M|2018-06-11|K|3.1-;
  2ybb|n|2018-06-11|K|3.1-;

Knotoid types		pdb	Title
K 3.1m	₂	6s4qA	Scdsav(sask) - engineering single-chain dimeric streptavidin as host for artificial metalloenzymes
K 3.1m	₁	6raoI	Cryo-em structure of the anti-feeding prophage (afp) baseplate, 6-fold symmetrised
K 3.1m	₁	4ye9A	The crystal structure of the g45v mutant of human glnrs
K 3.1m	₁	3gbnL	Crystal structure of fab cr6261 in complex with the 1918 h1n1 influenza virus hemagglutinin
K 3.1m	₁	3iykA	Bluetongue virus structure reveals a sialic acid binding domain, amphipathic helices and a central coiled coil in the outer capsid proteins
K 3.1m		3m9sM	Crystal structure of respiratory complex i from thermus thermophilus
K 3.1m		3m9cM	Crystal structure of the membrane domain of respiratory complex i from escherichia coli
K 3.1m		2ybbn	Fitted model for bovine mitochondrial supercomplex i1iii2iv1 by single particle cryo-em (emd-1876)

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Search results query: topological notation for knotoids with Artifacts: K 3.1m