2BM0A

Ribosomal elongation factor g (ef-g) fusidic acid resistant mutant t84a
Warning
  • Chain breaks within knot 41 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
Genus: 178
Knot K 41

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Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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41 53-372 320 1-52, 373-686 52 314 knot
Chain Sequence
KVEYDLKRLRNIGIAAHIDAGKTTTTERILYYTGRIHKIA--------------------TITAAVTTCFWKDHRINIIDAPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYKVPRIAFANKMDKTGADLWLVIRTMQERLGARPVVMQLPIGREDTFSGIIDVLRMKAYTYGNDLGTDIREIPIPEEYLDQAREYHEKLVEVAADFDENIMLKYLEGEEPTEEELVAAIRKGTIDLKITPVFLGSALKNKGVQLLLDAVVDYLPSPLDIPPIKGTTPEGEVVEIHPDPNGPLAALAFKIMADPYVGRLTFIRVYSGTLTSGSYVYNTTKGRKERVARLLRMHANHREEVEELKAGDLGAVVGLKETITGDTLVGEDAPRVILESIEVPEPVIDVAIEPKTKADQEKLSQALARLAEEDPTFRVSTHPETGQTIISGMGELHLEIIVDRLKREFKVDANVGKPQVAYRETITKPVDVEGKFIRQTGGRGQYGHVKIKVEPLPRGSGFEFVNAIVGGVIPKEYIPAVQKGIEEAMQSGPLIGFPVVDIKVTLYDGSYHEVDSSEMAFKIAGSMAIKEAVQKGDPVILEPIMRVEVTTPEEYMGDVIGDLNARRGQILGMEPRGNAQVIRAFVPLAEMFGYATDLRSKTQGRGSFVMFFDHYQEVPKQVQEKLIK
Whole chain analysis

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Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1


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Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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4.1 6-365 360 1-5 372-666 366-371 5 295 slipknot
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3.2 10-358 349 1-2, 375-666 3-9, 359-374 2 292 slipknot
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3.2 13-352 340 1-7, 364-666 8-12, 353-363 7 303 slipknot
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4.1 41-431 391 432-666 1-9 10-40 9 234 slipknot
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4.1 21-365 345 1-13, 373-666 14-20, 366-372 13 294 slipknot
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3.2 41-343 303 1-16, 355-666 17-40, 344-354 16 312 slipknot
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3.2 41-359 319 1-16, 407-666 17-40, 360-406 16 260 slipknot
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4.1 40-354 315 1-33, 360-666 34-39, 355-359 33 307 slipknot
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4.1 41-354 314 1-39, 360-666 40-40, 355-359 39 307 slipknot
How to cite
KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling