| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
41 | 223-422 | 200 | 1-222, 423-489 | 222 | 67 | knot | ||||
| view details |
 |
+31 | 252-365 | 114 | 1-230, 420-489 | 231-251, 366-419 | 230 | 70 | slipknot |
Chain Sequence |
MANYFNTLNLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHSDVVRTVQPLMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWETITEALKQGGITLMMDRLSNPAKLRAYALSEQLKEIMAPLFQKHMDDIISGEFSSGMMADWANDDKKLLTWREETGKTAFETAPQYEGKIGEQEYFDKGVLMIAMVKAGVELAFETMVDSGIIEESAYYESLHELPLIANTIARKRLYEMNVVISDTAEYGNYLFSYACVPLLKPFMAELQPGDLGKAIPEGAVDNGQLRDVNEAIRSHAIEQVGKKLRGYMTDMKRIAV
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
4.1 | 219-428 | 210 | 1-218, 429-489 | 218 | 61 | knot | ||||
| view details |
 |
3.2 | 217-417 | 201 | 1-216 | 433-489 | 418-432 | 216 | 57 | slipknot | ||
| view details |
|
4.1 | 220-433 | 214 | 434-489 | 1-218 | 219-219 | 218 | 55 | slipknot | ||
| view details |
 |
2.1 | 239-370 | 132 | 1-220, 392-489 | 221-238, 371-391 | 220 | 98 | slipknot | |||
| view details |
 |
1.1 | 242-416 | 175 | 1-227, 427-489 | 228-241, 417-426 | 227 | 63 | slipknot | |||
| view details |
|
1.1 | 242-426 | 185 | 1-228, 429-489 | 229-241, 427-428 | 228 | 61 | slipknot | |||
| view details |
 |
3.1 | 249-372 | 124 | 1-237, 394-489 | 238-248, 373-393 | 237 | 96 | slipknot | |||
| view details |
|
3.1 | 250-372 | 123 | 1-248, 394-489 | 249-249, 373-393 | 248 | 96 | slipknot | |||
| view details |
|
2.1 | 257-414 | 158 | 1-246, 427-489 | 247-256, 415-426 | 246 | 63 | slipknot | |||
| view details |
|
2.1 | 259-367 | 109 | 1-247, 381-489 | 248-258, 368-380 | 247 | 109 | slipknot | |||
| view details |
|
2.1 | 259-380 | 122 | 1-249, 391-489 | 250-258, 381-390 | 249 | 99 | slipknot | |||
| view details |
|
1.1 | 258-393 | 136 | 1-247, 404-489 | 248-257, 394-403 | 247 | 86 | slipknot |
| sequence length |
489
|
| structure length |
489
|
| publication title |
Bacterial and plant ketol-acid reductoisomerases have different mechanisms of induced fit during the catalytic cycle
pubmed doi rcsb |
| molecule tags |
Oxidoreductase
|
| molecule keywords |
Ketol-acid reductoisomerase
|
| source organism |
Escherichia coli
|
| total genus |
 Genus: 210
|
| ec nomenclature |
ec
1.1.1.86: Ketol-acid reductoisomerase. |
| pdb deposition date | 2011-11-11 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF01450 | IlvC | Acetohydroxy acid isomeroreductase, catalytic domain |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Alpha | Orthogonal Bundle | N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 |
#chains in the KnotProt database with same CATH superfamily 1YVE I; 3FR8 A; 3FR7 A; 1QMG A; 1YRL A; 3ULK A; #chains in the KnotProt database with same CATH topology 1YVE I; 3FR8 A; 3FR7 A; 1QMG A; 1YRL A; 3ULK A; #chains in the KnotProt database with same CATH homology 1YVE I; 3FR8 A; 3FR7 A; 1QMG A; 1YRL A; 3ULK A;
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
