| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 16-108 | 93 | 1-12, 260-290 | 13-15, 109-259 | 12 | 31 | slipknot |
Chain Sequence |
ASELRSIFSLKKIADAVNGYEEAKYVVFGIPFDNTSSYRRGSKYAPDSIRGAYVNLESYEYSYGIDLLASGMADLGDMEESEDVEYVIDTVESVVSAVMSDGKIPIMLGGEHSITVGAVRALPKDVDLVIVDAHSDFRSSYMGNKYNHACVTRRALDLLGEGRITSIGIRSVSREEFEDPDFRKVSFISSFDVKKNGIDKYIEEVDRKSRRVYISVDMDGIDPAYAPAVGTPEPFGLADTDVRRLIERLSYKAVGFDIVEFSPLYDNGNTSMLAAKLLQVFIASREKYYK
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 17-85 | 69 | 1-11, 103-290 | 12-16, 86-102 | 11 | 188 | slipknot | |||
| view details |
|
2.1 | 17-116 | 100 | 1-12, 128-290 | 13-16, 117-127 | 12 | 163 | slipknot | |||
| view details |
 |
3.14 | 20-107 | 88 | 1-14, 112-290 | 15-19, 108-111 | 14 | 179 | slipknot |
| sequence length |
290
|
| structure length |
290
|
| publication title |
The crystal structure of agmatine ureohydrolase of Thermoplasma volcanium
rcsb |
| molecule tags |
Hydrolase
|
| molecule keywords |
Agmatine ureohydrolase
|
| source organism |
Thermoplasma volcanium gss1
|
| total genus |
 Genus: 106
|
| ec nomenclature | |
| pdb deposition date | 2010-12-14 |
| KnotProt deposition date | 2014-10-08 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF00491 | Arginase | Arginase family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
