| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
41 | 11-261 | 251 | 1-10, 262-304 | 10 | 43 | knot |
Chain Sequence |
TNCDREPIHIPGAIQPHGVLLVLSEPGLVLTHASENAPAVLGNSAEQLLGAPLGHFIEPSVREPLEADLRSARLKQLNPLKVVWRVDGVDRFFDGIAHRHQGRLILELEPSSHREAVPFLSFFHAVRDGLSRLRDARDLQELCEAVVQEVRGLTGFDRAIIYRFDAEWNGSVIAEARDARADPYLGLHFPASDIPRQARELYQLNWLRIIPTIDYQPARVRALPGHGEPLDLSFSVLRSVSPIHLEYLHNMGVQASMSISLMKDGKLWGLISCHQVSGTRYVPYEVRTACEFLGEVMSSLLAAK
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
4.1 | 11-300 | 290 | 1-10, 301-304 | 10 | 4 | knot | ||||
| view details |
 |
3.2m | 11-254 | 244 | 1-10 | 263-304 | 255-262 | 10 | 42 | slipknot | ||
| view details |
|
4.1 | 8-262 | 255 | 1-7 | 268-304 | 263-267 | 7 | 37 | slipknot | ||
| view details |
|
3.2m | 13-264 | 252 | 1-12 | 275-304 | 265-274 | 12 | 30 | slipknot | ||
| view details |
|
3.2m | 11-274 | 264 | 1-10 | 276-304 | 275-275 | 10 | 29 | slipknot | ||
| view details |
|
3.2m | 12-280 | 269 | 1-11 | 301-304 | 281-300 | 11 | 4 | slipknot |
| sequence length |
304
|
| structure length |
304
|
| publication title |
Crystal structure of the chromophore-binding domain of Stigmatella aurantiaca bacteriophytochrome (Thr289His mutant) in the Pr state
rcsb |
| molecule tags |
Signaling protein
|
| molecule keywords |
Photoreceptor-histidine kinase BphP
|
| source organism |
Stigmatella aurantiaca
|
| total genus |
 Genus: 96
|
| ec nomenclature | |
| pdb deposition date | 2014-10-31 |
| KnotProt deposition date | 2018-09-05 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
