| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 23-248 | 226 | 1-22, 249-260 | 22 | 12 | knot |
Chain Sequence |
HWRYGGDPPWPRVSPACAGRFQSPVDIRPQLAAFSPALRPLELSGFQLPPLPELRLRNNGHSVQLTLPPGLEMKLGPGREYRALQLHLHWGAAGRPGSEHTVEGHRFPAEIHVVHLSTKYARVDEALGRPGGLAVLAAFLEEGPEENSAYEQLLSRLEEIAEEGSETQVPGLDISALLPSDFSRYFQYEGSLTTPPCAQGVIWTVFNQTVSLSAKQLHTLSDTLWGPGDSRLQLNFRATQPLNGRVIEASFPAGVDSSPR
|
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
+ 31 | 24-227 | 204 | 1-23, 228-239 | 23 | 12 | knot |
| Fingerprint | Knot forming loop | Loop type | ||||
|---|---|---|---|---|---|---|
|
|
K +31 | Chain closureHis140 <-> Arg399 ... His251 <-> Bridging ionZn401 <-> His228 ... His140 |
probabilistic | |||
|
|
K +31 | Chain closureHis140 <-> Arg399 ... His251 <-> Bridging ionZn401 <-> His226 ... His140 |
probabilistic | |||
|
|
K +31 | His140 ... His226 <-> Bridging ionZn401 <-> His228 ... Chain closureArg399 <-> His140 |
probabilistic |
Chain Sequence |
HWRYGGDPPWPRVSPACAGRFQSPVDIRPQLAAFSPALRPLELSGFQLPPLPELRLRNNGHSVQLTLPPGLEMKLGPGREYRALQLHLHWGAAGRPGSEHTVEGHRFPAEIHVVHLSTKYARVDEALGRPGGLAVLAAFLEEGPEENSAYEQLLSRLEEIAEEGSETQVPGLDISALLPSDFSRYFQYEGSLTTPPCAQGVIWTVFNQTVSLSAKQLHTLSDTLWGPGDSRLQLNFRATQPLNGRVIEASFPAGVDSSPR
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 23-250 | 228 | 1-22, 251-260 | 22 | 10 | knot | ||||
| view details |
 |
2.1 | 21-247 | 227 | 1-20 | 252-260 | 248-251 | 20 | 9 | slipknot | ||
| view details |
|
3.1 | 26-251 | 226 | 252-260 | 1-22 | 23-25 | 22 | 8 | slipknot |
| sequence length |
260
|
| structure length |
260
|
| publication title |
The Structure of Carbonic Anhydrase IX Is Adapted for Low-pH Catalysis.
pubmed doi rcsb |
| molecule tags |
Lyase
|
| molecule keywords |
Carbonic anhydrase 9
|
| source organism |
Homo sapiens
|
| total genus |
 Genus: 71
|
| ec nomenclature | |
| pdb deposition date | 2015-09-21 |
| KnotProt deposition date | 2018-10-18 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
