5TJ6A

Ca2+ bound aplysia slo1
Warning
  • Chain breaks within knot 31 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
Knot K -31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
-31 467-968 502 1-466, 969-1052 466 84 knot
Chain Sequence
RQWYSFLASSLVTFGSGLVVIIIYRIVLWLC----------------------------------GWMTEAKDWAGELISGQTTTGRILVGLVFLLSIASLIIYFIDASTNSSSTTQQVDLAFNVFFMIYFFIRFVAANDKLWFW---------VELFSFVDYFTIPPSFVAIYLDRNWLGLRFLRALRLMSIPDILTYLNVLKTSTLIRLVQLVVSFVSLWLTAAGFLHLLENSGDPFFDFGNAQHLTYWECLYFLMVTMSTVGFGDIFATTVLGRTFVVIFIMIFIGLFASFIPEIAEILGKRQKYGGSYKKERGKRHVVVCGYITFDSVSNFLKDFLHKDREDVDVEIVFLHKGLPGLELEGLLKRHFTQVEYFWGSVMDANDLERVKIQEADACLVLANKYCQDPDQEDAANIMRVISIKNYHSDIKVIVQLLQYHNKAYLLNIPSWDWKRGDDAVCVAELKLGFIAQSCLAPGFSTLMANLFTMRSYKPTPEMSQWQTDYMRGTGMEMYTEYLSSAFNALTFPEAAELCFSKLKLLLLAIEVRESTLAINPGPKVKIENATQGFFIAESAEEVKRAFYYCKNCHAN-----VSDVRQIKKCKCRKFDSTGMFHWCPDRPLNDCLQDRSQASASGLRNHVVVCLFADAASPL------------------------------------------------------------------------------------IGLRNLVMPLRASNFHYHELKPTIIVGNLDYLHREWKTLQNFPKLSILPGSPLNRANLRAVNINLCDMCVIVSAKDRNMEDPNLVDKEAILCSLNIKAMTFDDAGANVPLITELANDSNVQFLDQDDDDDPDTELYMTQPFACGTAFAVSVLDSLMSTSYFNDNALTLIRTLITGGATPELEQILAEGAGMRGGYCSPAVLANRDRCRVAQISLFDGPLAQFGQGGHYGELFVYA-------------------------LRHFGILCIGLYRFRDTNPSSKRYVITNPPEDFPLLPTDQVYVLTYK
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type

KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling