| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 36-272 | 237 | 1-19, 537-537 | 20-35, 273-536 | 19 | 1 | slipknot | |||
| view details |
 |
41 | 10-307 | 298 | 1-9 | 356-537 | 308-355 | 9 | 182 | slipknot |
Chain Sequence |
RETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMAWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIHRSKGLQDLGGISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGATLPGAWRGVLFYLKPNWQKLLETGVWIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHVWAKRRERFVLAVVITCFFGSLVTLTFGGAYVVKLLEEYATGPAVLTVALIEAVAVSWFYGITQFCRDVKEMLGFSPGWFWRICWVAISPLFLLFIICSFLMSPPQLRLFQYNYPYWSIILGYCIGTSSFICIPTYIAYRLIITPGTFKERIIKSITPE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 10-297 | 288 | 1-9 | 308-537 | 298-307 | 9 | 230 | slipknot | ||
| view details |
 |
4.1 | 10-307 | 298 | 1-9 | 323-537 | 308-322 | 9 | 215 | slipknot | ||
| view details |
|
4.1 | 18-337 | 320 | 1-17 | 357-537 | 338-356 | 17 | 181 | slipknot | ||
| view details |
 |
2.1 | 40-263 | 224 | 1-16, 283-537 | 17-39, 264-282 | 16 | 255 | slipknot | |||
| view details |
|
2.1 | 42-362 | 321 | 1-16, 402-537 | 17-41, 363-401 | 16 | 136 | slipknot | |||
| view details |
|
2.1 | 42-422 | 381 | 423-537 | 1-16 | 17-41 | 16 | 114 | slipknot | ||
| view details |
 |
1.1 | 38-253 | 216 | 1-21, 264-537 | 22-37, 254-263 | 21 | 274 | slipknot | |||
| view details |
|
1.1 | 41-285 | 245 | 1-25, 304-537 | 26-40, 286-303 | 25 | 234 | slipknot |
| sequence length |
537
|
| structure length |
537
|
| publication title |
Cryo-EM structure of the human serotonin transporter in complex with ibogaine
rcsb |
| molecule tags |
Transport protein/immune system
|
| molecule keywords |
Sodium-dependent serotonin transporter
|
| source organism |
Homo sapiens
|
| total genus |
 Genus: 132
|
| ec nomenclature | |
| pdb deposition date | 2018-07-05 |
| KnotProt deposition date | 2019-05-07 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
