| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 37-272 | 236 | 273-537 | 1-20 | 21-36 | 20 | 264 | slipknot | ||
| view details |
 |
41 | 10-306 | 297 | 1-9 | 363-537 | 307-362 | 9 | 175 | slipknot |
Chain Sequence |
RETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMAWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIHRSKGLQDLGGISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIALSVLLVRGATLPGAWRGVLFYLKPNWQKLLETGVWIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDSSFAGLEGVITAVLDEFPHVWAKRRERFVLAVVITCFFGSLVTLTFGGAYVVKLLEEYATGPAVLTVALIEAVAVSWFYGITQFCRDVKEMLGFSPGWFWRICWVAISPLFLLFIIASFLMSPPQLRLFQYNYPYWSIILGYAIGTSSFICIPTYIAYRLIITPGTFKERIIKSITPE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
4.1 | 11-307 | 297 | 1-10 | 328-537 | 308-327 | 10 | 210 | slipknot | ||
| view details |
 |
3.2 | 18-344 | 327 | 1-17 | 361-537 | 345-360 | 17 | 177 | slipknot | ||
| view details |
 |
2.1 | 41-364 | 324 | 1-16, 403-537 | 17-40, 365-402 | 16 | 135 | slipknot | |||
| view details |
|
2.1 | 42-422 | 381 | 423-537 | 1-16 | 17-41 | 16 | 114 | slipknot | ||
| view details |
|
2.1 | 39-265 | 227 | 1-18, 286-537 | 19-38, 266-285 | 18 | 252 | slipknot | |||
| view details |
 |
1.1 | 37-253 | 217 | 1-22, 266-537 | 23-36, 254-265 | 22 | 272 | slipknot | |||
| view details |
|
1.1 | 38-285 | 248 | 1-25, 304-537 | 26-37, 286-303 | 25 | 234 | slipknot | |||
| view details |
|
2.1 | 41-284 | 244 | 1-37, 302-537 | 38-40, 285-301 | 37 | 236 | slipknot | |||
| view details |
|
1.1 | 41-301 | 261 | 1-37, 304-537 | 38-40, 302-303 | 37 | 234 | slipknot |
| sequence length |
537
|
| structure length |
537
|
| publication title |
Cryo-EM structure of the human serotonin transporter in complex with ibogaine
rcsb |
| molecule tags |
Transport protein/immune system
|
| molecule keywords |
Sodium-dependent serotonin transporter
|
| source organism |
Homo sapiens
|
| total genus |
 Genus: 164
|
| ec nomenclature | |
| pdb deposition date | 2018-07-05 |
| KnotProt deposition date | 2019-05-07 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
