| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 38-275 | 238 | 276-540 | 1-21 | 22-37 | 21 | 264 | slipknot | ||
| view details |
 |
41 | 15-304 | 290 | 1-14 | 364-540 | 305-363 | 14 | 177 | slipknot |
Chain Sequence |
ERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMAWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIHRSKGLQDLGGISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGATLPGAWRGVLFYLKPNWQKLLETGVWIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHVWAKRRERFVLAVVITCFFGSLVTLTFGGAYVVKLLEEYATGPAVLTVALIEAVAVSWFYGITQFCRDVKEMLGFSPGWFWRICWVAISPLFLLFIICSFLMSPPQLRLFQYNYPYWSIILGYCIGTSSFICIPTYIAYRLIITPGTFKERIIKSITPETP
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 15-297 | 283 | 1-14 | 309-540 | 298-308 | 14 | 232 | slipknot | ||
| view details |
 |
4.1 | 14-308 | 295 | 1-13 | 354-540 | 309-353 | 13 | 187 | slipknot | ||
| view details |
|
3.2 | 17-349 | 333 | 1-16 | 361-540 | 350-360 | 16 | 180 | slipknot | ||
| view details |
|
3.2 | 15-360 | 346 | 1-14 | 371-540 | 361-370 | 14 | 170 | slipknot | ||
| view details |
|
3.2 | 18-346 | 329 | 1-13, 360-540 | 14-17, 347-359 | 13 | 181 | slipknot | |||
| view details |
|
4.1 | 18-338 | 321 | 1-13, 347-540 | 14-17, 339-346 | 13 | 194 | slipknot | |||
| view details |
 |
2.1 | 42-367 | 326 | 1-19, 401-540 | 20-41, 368-400 | 19 | 140 | slipknot | |||
| view details |
|
2.1 | 42-425 | 384 | 1-20, 486-540 | 21-41, 426-485 | 20 | 55 | slipknot | |||
| view details |
 |
1.1 | 40-254 | 215 | 1-25, 268-540 | 26-39, 255-267 | 25 | 273 | slipknot | |||
| view details |
|
1.1 | 43-286 | 244 | 1-30, 304-540 | 31-42, 287-303 | 30 | 237 | slipknot |
| sequence length |
540
|
| structure length |
540
|
| publication title |
Cryo-EM structures of human serotonin transporter in complex with ibogaine
rcsb |
| molecule tags |
Transport protein/immune system
|
| molecule keywords |
Sodium-dependent serotonin transporter
|
| source organism |
Homo sapiens
|
| total genus |
 Genus: 126
|
| ec nomenclature | |
| pdb deposition date | 2018-07-05 |
| KnotProt deposition date | 2019-05-07 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
