| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 103-143 | 41 | 1-102, 144-236 | 102 | 93 | knot |
Chain Sequence |
LVPRGSHMNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFRGIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQAAG
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 101-144 | 44 | 1-100, 145-236 | 100 | 92 | knot | ||||
| view details |
 |
3.1 | 103-154 | 52 | 1-100, 163-236 | 101-102, 155-162 | 100 | 74 | slipknot | |||
| view details |
|
3.1 | 104-156 | 53 | 157-236 | 1-100 | 101-103 | 100 | 79 | slipknot |
| sequence length |
236
|
| structure length |
236
|
| publication title |
Unique substrate specificity of type II tRNA Gm18 methyltransferase from Escherichia coli
rcsb |
| molecule tags |
Transferase
|
| molecule keywords |
tRNA (guanosine(18)-2'-O)-methyltransferase
|
| source organism |
Escherichia coli
|
| ec nomenclature |
ec
2.1.1.34: tRNA (guanosine(18)-2'-O)-methyltransferase. |
| pdb deposition date | 2021-03-15 |
| KnotProt deposition date | 2022-05-15 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF00588 | SpoU_methylase | SpoU rRNA Methylase family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
