2DCWA

The solution structure of horseshoe crab antimicrobial peptide tachystatin b with the inhibitory cystine-knot motif
Cysteine knot
Loop Piercing
view details
4-c-11-b-25-c-20 19-b-37
Chain Sequence
YITCLFRGARCRVYSGRSCCFGYYCRRDFPGSIFGTCSRRNF
sequence length 42
structure length 42
publication title The solution structure of horseshoe crab antimicrobial peptide tachystatin B with an inhibitory cystine-knot motif
pubmed doi rcsb
molecule tags Antimicrobial protein
molecule keywords Tachystatin-B2
ec nomenclature
pdb deposition date 2006-01-16
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
4.10.40.20 Few Secondary Structures Irregular Omega-AgatoxinV Omega-AgatoxinV 2dcwA00
2DCVA 1CIXA 2DCWA
chains in the KnotProt database with same CATH superfamily
2ROOA 1CIXA 1AGGA 1G9PA 1OMBA 1VTXA 1OAWA 2DCWA 1OMAA 1IVAA 2DCVA 1QDPA 1OAVA
chains in the KnotProt database with same CATH topology
2ROOA 1CIXA 1AGGA 1G9PA 1OMBA 1VTXA 1OAWA 2DCWA 1OMAA 1IVAA 2DCVA 1QDPA 1OAVA
chains in the KnotProt database with same CATH homology


 
#chains in the KnotProt database with same CATH superfamily
 2DCV A;  1CIX A;  2DCW A; 
#chains in the KnotProt database with same CATH topology
 2ROO A;  1CIX A;  1AGG A;  1G9P A;  1OMB A;  1VTX A;  1OAW A;  2DCW A;  1OMA A;  1IVA A;  2DCV A;  1QDP A;  1OAV A; 
#chains in the KnotProt database with same CATH homology
 2ROO A;  1CIX A;  1AGG A;  1G9P A;  1OMB A;  1VTX A;  1OAW A;  2DCW A;  1OMA A;  1IVA A;  2DCV A;  1QDP A;  1OAV A; 
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similar chains in the KnotProt database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the KnotProt database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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