Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
view details | +31 | 12-261 | 250 | 1-11, 262-383 | 11 | 122 | knot |
Chain Sequence |
AKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQLLRDAAGLK
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
view details | 3.1 | 17-276 | 260 | 1-16 | 346-383 | 277-345 | 16 | 38 | slipknot | |||
view details | 1.1 | 17-242 | 226 | 1-4, 253-383 | 5-16, 243-252 | 4 | 131 | slipknot | ||||
view details | 2.1 | 18-362 | 345 | 363-383 | 1-4 | 5-17 | 4 | 20 | slipknot | |||
view details | 1.1 | 17-349 | 333 | 1-7, 363-383 | 8-16, 350-362 | 7 | 21 | slipknot |
sequence length |
383
|
structure length |
383
|
publication title |
Crystal structure of the s-adenosylmethionine synthetase ternary complex: a novel catalytic mechanism of s-adenosylmethionine synthesis from ATP and MET.
pubmed doi rcsb |
molecule tags |
Transferase
|
molecule keywords |
S-adenosylmethionine synthetase
|
source organism |
Escherichia coli
|
total genus |
Genus: 121
|
ec nomenclature |
ec
2.5.1.6: Methionine adenosyltransferase. |
pdb deposition date | 2003-05-02 |
KnotProt deposition date | 2014-07-31 |
chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
---|---|---|---|
A | PF00438 | S-AdoMet_synt_N | S-adenosylmethionine synthetase, N-terminal domain |
cath code
| Class | Architecture | Topology | Homology | Domain |
---|---|---|---|---|---|
Alpha Beta | 2-Layer Sandwich | GMP Synthetase; Chain A, domain 3 | GMP Synthetase; Chain A, domain 3 | ||
Alpha Beta | 2-Layer Sandwich | GMP Synthetase; Chain A, domain 3 | GMP Synthetase; Chain A, domain 3 | ||
Alpha Beta | 2-Layer Sandwich | GMP Synthetase; Chain A, domain 3 | GMP Synthetase; Chain A, domain 3 |
#chains in the KnotProt database with same CATH superfamily 1MXB A; 1P7L A; 1RG9 A; 1MXA A; 1XRA A; 2OBV A; 1XRB A; 2P02 A; 1O92 A; 1XRC A; 1O9T A; 1FUG A; 3IML A; 1QM4 A; 1O90 A; 1MXC A; 1O93 A; #chains in the KnotProt database with same CATH topology 1MXB A; 1P7L A; 1RG9 A; 1MXA A; 1XRA A; 2OBV A; 1XRB A; 2P02 A; 1O92 A; 1XRC A; 1O9T A; 1FUG A; 3IML A; 1QM4 A; 1O90 A; 1MXC A; 1O93 A; #chains in the KnotProt database with same CATH homology 1MXB A; 1P7L A; 1RG9 A; 1MXA A; 1XRA A; 2OBV A; 1XRB A; 2P02 A; 1O92 A; 1XRC A; 1O9T A; 1FUG A; 3IML A; 1QM4 A; 1O90 A; 1MXC A; 1O93 A;
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...