Found 56 chains in Knotted chains table. Displaying 1 - 56. Applied filters: Probabilistic

Search results query: Alpha/beta knot

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#pdbid|chain|deposition date|is S/K-not|(slip)knot types;
      
  4cng|B|2018-09-16|K|+3.1;
  4cnf|B|2018-09-16|K|+3.1;
  4cne|B|2018-09-16|K|+3.1;
  1j85|A|2018-08-14|K|+3.1;
  4h3y|A|2014-08-19|K|+3.1;
  4ig6|A|2014-08-19|K|+3.1;
  3axz|A|2014-08-19|K|+3.1;
  3ky7|A|2014-07-31|K|+3.1;
  3aia|A|2014-07-31|K|+3.1;
  3kty|A|2014-07-31|K|+3.1;
  3knu|A|2014-07-31|K|+3.1;
  3ilk|A|2014-07-31|K|+3.1;
  3ief|A|2014-07-31|K|+3.1;
  3ic6|A|2014-07-31|K|+3.1;
  3gyq|A|2014-07-31|K|+3.1;
  3e5y|A|2014-07-31|K|+3.1;
  3dcm|X|2014-07-31|K|+3.1;
  3ai9|X|2014-07-31|K|+3.1;
  3l8u|A|2014-07-31|K|+3.1;
  3n4j|A|2014-07-31|K|+3.1;
  3n4k|A|2014-07-31|K|+3.1;
  3nk6|A|2014-07-31|K|+3.1;
  3nk7|A|2014-07-31|K|+3.1;
  3onp|A|2014-07-31|K|+3.1;
  3quv|A|2014-07-31|K|+3.1;
  4e8b|A|2014-07-31|K|+3.1;
  4fak|A|2014-07-31|K|+3.1;
  4h3z|A|2014-07-31|K|+3.1;
  1vh0|A|2014-07-31|K|+3.1;
  1gz0|A|2014-07-31|K|+3.1;
  1k3r|A|2014-07-31|K|+3.1;
  1mxi|A|2014-07-31|K|+3.1;
  1ns5|A|2014-07-31|K|+3.1;
  1nxz|A|2014-07-31|K|+3.1;
  1o6d|A|2014-07-31|K|+3.1;
  1p9p|A|2014-07-31|K|+3.1;
  1to0|A|2014-07-31|K|+3.1;
  1uaj|A|2014-07-31|K|+3.1;
  1ual|A|2014-07-31|K|+3.1;
  1uam|A|2014-07-31|K|+3.1;
  1v2x|A|2014-07-31|K|+3.1;
  1v6z|A|2014-07-31|K|+3.1;
  1uak|A|2014-07-31|K|+3.1;
  1vhk|A|2014-07-31|K|+3.1;
  1vhy|A|2014-07-31|K|+3.1;
  1x7o|A|2014-07-31|K|+3.1;
  1x7p|A|2014-07-31|K|+3.1;
  1zjr|A|2014-07-31|K|+3.1;
  2cx8|A|2014-07-31|K|+3.1;
  2ha8|A|2014-07-31|K|+3.1;
  2i6d|A|2014-07-31|K|+3.1;
  2o3a|A|2014-07-31|K|+3.1;
  2qmm|A|2014-07-31|K|+3.1;
  2qwv|A|2014-07-31|K|+3.1;
  2yy8|A|2014-07-31|K|+3.1;
  2z0y|A|2014-07-31|K|+3.1;
Knot types Knot loop types pdb Title
K +31
1
4cngB Crystal structure of sulfolobus acidocaldarius trmj in complex with s-adenosyl-l-homocysteine
K +31
1
4cnfB Crystal structure of sulfolobus acidocaldarius trmj
K +31
1
4cneB Crystal structure of e.coli trmj in complex with s-adenosyl-l- homocysteine
K +31 1j85A Structure of yibk from haemophilus influenzae (hi0766), a truncated sequence homolog of trna (guanosine-2'-o-) methyltransferase (spou)
K +31 4h3yA Crystal structure of an asymmetric dimer of a trna (guanine-(n(1)-)-methyltransferase from burkholderia phymatum bound to s-adenosyl homocystein in one half-site
K +31 4ig6A Crystal structure of a trna (guanine-n1)-methyltransferase from anaplasma phagocytophilum bound to s-adenosylhomocysteine
K +31 3axzA Crystal structure of haemophilus influenzae trmd in complex with adenosine
K +31 3ky7A 2.35 angstrom resolution crystal structure of a putative trna (guanine-7-)-methyltransferase (trmd) from staphylococcus aureus subsp. aureus mrsa252
K +31 3aiaA Crystal structure of duf358 reveals a putative spout-class methltransferase
K +31
1
3ktyA Crystal structure of probable methyltransferase from bordetella pertussis tohama i
K +31 3knuA Crystal structure of trna (guanine-n1)-methyltransferase from anaplasma phagocytophilum
K +31 3ilkA The structure of a probable methylase family protein from haemophilus influenzae rd kw20
K +31 3iefA Crystal structure of trna guanine-n1-methyltransferase from bartonella henselae using mpcs.
K +31
1
3ic6A Crystal structure of putative methylase family protein from neisseria gonorrhoeae
K +31 3gyqA Structure of the thiostrepton-resistance methyltransferase s-adenosyl-l-methionine complex
K +31 3e5yA Crystal structure of trmh family rna methyltransferase from burkholderia pseudomallei
K +31 3dcmX Crystal structure of the thermotoga maritima spout family rna-methyltransferase protein tm1570 in complex with s-adenosyl-l-methionine
K +31 3ai9X Crystal structure of duf358 protein reveals a putative spout-class rrna methyltransferase
K +31 3l8uA Crystal structure of smu.1707c, a putative rrna methyltransferase from streptococcus mutans ua159
K +31 3n4jA Putative rna methyltransferase from yersinia pestis
K +31 3n4kA Putative rna methyltransferase from yersinia pestis in complex with s-adenosyl-l-homocysteine.
K +31 3nk6A Structure of the nosiheptide-resistance methyltransferase
K +31 3nk7A Structure of the nosiheptide-resistance methyltransferase s-adenosyl-l-methionine complex
K +31 3onpA Crystal structure of trna/rrna methyltransferase spou from rhodobacter sphaeroides
K +31 3quvA Crystal structure of a trna-guanine-n1-methyltransferase from mycobacterium abscessus
K +31 4e8bA Crystal structure of 16s rrna methyltransferase rsme from e.coli
K +31 4fakA Crystal structure of orfx in complex with s-adenosylmethionine
K +31 4h3zA Crystal structure of a symmetric dimer of a trna (guanine-(n(1)-)-methyltransferase from burkholderia phymatum bound to s-adenosyl homocystein in both half-sites
K +31 1vh0A Crystal structure of a hypothetical protein
K +31 1gz0A 23s ribosomal rna g2251 2'o-methyltransferase rlmb
K +31 1k3rA Crystal structure of the methyltransferase with a knot from methanobacterium thermoautotrophicum
K +31 1mxiA Structure of yibk from haemophilus influenzae (hi0766): a methyltransferase with a cofactor bound at a site formed by a knot
K +31 1ns5A X-ray structure of ybea from e.coli. northeast structural genomics research consortium (nesg) target er45
K +31 1nxzA X-ray crystal structure of protein yggj_haein of haemophilus influenzae. northeast structural genomics consortium target ir73.
K +31 1o6dA Crystal structure of a hypothetical protein
K +31 1p9pA The crystal structure of a m1g37 trna methyltransferase, trmd
K +31 1to0A X-ray structure of northeast structural genomics target protein sr145 from bacillus subtilis
K +31 1uajA Crystal structure of trna(m1g37)methyltransferase: insight into trna recognition
K +31 1ualA Crystal structure of trna(m1g37)methyltransferase: insight into trna recognition
K +31 1uamA Crystal structure of trna(m1g37)methyltransferase: insight into trna recognition
K +31 1v2xA Trmh
K +31 1v6zA Crystal structure of tt1573 from thermus thermophilus
K +31 1uakA Crystal structure of trna(m1g37)methyltransferase: insight into trna recognition
K +31
1
1vhkA Crystal structure of an hypothetical protein
K +31 1vhyA Crystal structure of haemophilus influenzae protein hi0303, pfam duf558
K +31 1x7oA Crystal structure of the spou methyltransferase avirb from streptomyces viridochromogenes
K +31 1x7pA Crystal structure of the spou methyltransferase avirb from streptomyces viridochromogenes in complex with the cofactor adomet
K +31 1zjrA Crystal structure of a. aeolicus trmh/spou trna modifying enzyme
K +31 2cx8A Crystal structure of methyltransferase with ligand(sah)
K +31 2ha8A Methyltransferase domain of human tar (hiv-1) rna binding protein 1
K +31 2i6dA The structure of a putative rna methyltransferase of the trmh family from porphyromonas gingivalis.
K +31
1
2o3aA Crystal structure of a protein af_0751 from archaeoglobus fulgidus
K +31 2qmmA Crystal structure of apc86534.1 (c-terminal domain of ncbi aab90184.1; pfam big 123.1)
K +31
1
2qwvA Crystal structure of unknown function protein vca1059
K +31 2yy8A Crystal structure of archaeal trna-methylase for position 56 (atrm56) from pyrococcus horikoshii, complexed with s-adenosyl-l-methionine
K +31 2z0yA Crystal structure of ttha0657-sam complex
How to cite
KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling