Found 60 chains in Knotoided chains table. Displaying 1 - 60. Applied filters: Probabilistic

Search results query: topological notation for knotoids: S 3.1

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#pdbid|chain|deposition date|is S/K-not|(slip)knot types;
      
  6mpb|A|2019-11-16|S|3.1;
  6pso|A|2019-10-19|S|3.1;
  6j66|A|2019-09-11|S|3.1;
  6hhm|A|2019-09-11|S|3.1;
  6eaj|F|2019-09-09|S|3.1;
  6eam|F|2019-09-09|S|3.1;
  6eak|F|2019-09-08|S|3.1;
  6eai|A|2019-09-08|S|3.1;
  6eag|F|2019-09-08|S|3.1;
  6eaf|A|2019-09-08|S|3.1;
  6ead|F|2019-09-08|S|3.1;
  6eal|F|2019-09-08|S|3.1;
  6eae|F|2019-09-08|S|3.1;
  6dc3|F|2019-09-07|S|3.1;
  3wbh|A|2018-10-21|S|3.1;
  5tok|A|2018-09-13|S|3.1;
  5ude|F|2018-09-13|S|3.1;
  5ea6|F|2018-09-12|S|3.1;
  5c6b|F|2018-09-12|S|3.1;
  3nkn|A|2018-06-12|S|3.1;
  5nj5|B|2018-06-12|S|3.1;
  5k6b|F|2018-06-12|S|3.1;
  4oqm|A|2018-06-11|S|3.1;
  1vl4|A|2018-06-11|S|3.1;
  5udd|A|2018-06-11|S|3.1;
  5njb|A|2018-06-11|S|3.1;
  5nja|B|2018-06-11|S|3.1;
  5g2u|A|2018-06-11|S|3.1;
  5fgn|A|2018-06-11|S|3.1;
  4qax|A|2018-06-11|S|3.1;
  3dpc|A|2018-06-11|S|3.1;
  1e2s|P|2018-06-11|S|3.1;
  1ei6|A|2018-06-11|S|3.1;
  1ejj|A|2018-06-11|S|3.1;
  1jch|A|2018-06-11|S|3.1;
  1n2l|A|2018-06-11|S|3.1;
  2ify|A|2018-06-11|S|3.1;
  2j6b|A|2018-06-11|S|3.1;
  2j6c|A|2018-06-11|S|3.1;
  2j85|A|2018-06-11|S|3.1;
  2qqd|C|2018-06-11|S|3.1;
  2vqr|A|2018-06-11|S|3.1;
  2wcu|A|2018-06-11|S|3.1;
  3a52|A|2018-06-11|S|3.1;
  3b5q|A|2018-06-11|S|3.1;
  1e1z|P|2018-06-11|S|3.1;
  3mfb|A|2018-06-11|S|3.1;
  3p12|A|2018-06-11|S|3.1;
  3qtd|A|2018-06-11|S|3.1;
  4kjd|A|2018-06-11|S|3.1;
  4lr7|A|2018-06-11|S|3.1;
  4lra|A|2018-06-11|S|3.1;
  4mhx|A|2018-06-11|S|3.1;
  4mhx|B|2018-06-11|S|3.1;
  4miv|A|2018-06-11|S|3.1;
  4miv|B|2018-06-11|S|3.1;
  4miv|G|2018-06-11|S|3.1;
  4my4|A|2018-06-11|S|3.1;
  4n7t|A|2018-06-11|S|3.1;
  4nwx|A|2018-06-11|S|3.1;
Knotoid types pdb Title
S 3.1 6mpbA Cryo-em structure of the human neutral amino acid transporter asct2
S 3.1 6psoA Crystal structure of pss1_19b c77s in complex with iota-neocarratetraose
S 3.1
1
6j66A Chondroitin sulfate/dermatan sulfate endolytic 4-o-sulfatase
S 3.1 6hhmA Crystal structure of the family s1_7 ulvan-specific sulfatase fa22070 from formosa agariphila
S 3.1
1
6eajF Crystal structure of human respiratory syncytial virus fusion glycoprotein inhibitor escape variant t400a stabilized in the prefusion state
S 3.1
1
6eamF Crystal structure of human respiratory syncytial virus fusion glycoprotein inhibitor escape variant e487d stabilized in the prefusion state
S 3.1
1
6eakF Crystal structure of fusion inhibitor jnj-2408068 in complex with human respiratory syncytial virus fusion glycoprotein escape variant t400a stabilized in the prefusion state
S 3.1
1
6eaiA Crystal structure of human respiratory syncytial virus fusion glycoprotein inhibitor escape variant s398l stabilized in the prefusion state
S 3.1
1
6eagF Crystal structure of fusion inhibitor jnj-2408068 in complex with human respiratory syncytial virus fusion glycoprotein escape variant g143s stabilized in the prefusion state
S 3.1
1
6eafA Crystal structure of human respiratory syncytial virus fusion glycoprotein inhibitor escape variant g143s stabilized in the prefusion state
S 3.1
1
6eadF Crystal structure of human respiratory syncytial virus fusion glycoprotein inhibitor escape variant f140i stabilized in the prefusion state
S 3.1
1
6ealF Crystal structure of human respiratory syncytial virus fusion glycoprotein inhibitor escape variant d486n stabilized in the prefusion state
S 3.1
1
6eaeF Crystal structure of human respiratory syncytial virus fusion glycoprotein inhibitor escape variant l141w stabilized in the prefusion state
S 3.1
1
6dc3F Rsv prefusion f bound to rsd5 fab
S 3.1 3wbhA Structural characteristics of alkaline phosphatase from a moderately halophilic bacteria halomonas sp.593
S 3.1
1
5tokA Crystal structure of the rsv f glycoprotein in complex with the neutralizing single-domain antibody f-vhh-l66
S 3.1
1
5udeF Crystal structure of rsv f b9320 ds-cav1
S 3.1
1
5ea6F Crystal structure of inhibitor bta-9881 in complex with prefusion rsv f glycoprotein
S 3.1
1
5c6bF Crystal structure of prefusion-stabilized rsv f variant sc-tm
S 3.1
1
3nknA Crystal structure of mouse autotaxin in complex with 14:0-lpa
S 3.1 5nj5B E. coli microcin-processing metalloprotease tldd/e with phosphate bound
S 3.1 5k6bF Crystal structure of prefusion-stabilized rsv f single-chain 9 ds-cav1 variant.
S 3.1
4
4oqmA Crystal structure of thymidine kinase from herpes simplex virus type 1 in complex with f-ara-edu
S 3.1 1vl4A Crystal structure of a putative modulator of a dna gyrase (tm0727) from thermotoga maritima msb8 at 1.95 a resolution
S 3.1
1
5uddA Crystal structure of rsv f b9320 bound to medi8897
S 3.1 5njbA E. coli microcin-processing metalloprotease tldd/e with actinonin bound
S 3.1 5njaB E. coli microcin-processing metalloprotease tldd/e with angiotensin analogue bound
S 3.1
1
5g2uA Structure of bt1596,a 2-o gag sulfatase
S 3.1 5fgnA Integral membrane protein lipooligosaccharide phosphoethanolamine transferase a (epta) from neisseria meningitidis
S 3.1 4qaxA Crystal structure of post-catalytic binary complex of phosphoglycerate mutase from staphylococcus aureus
S 3.1 3dpcA Structure of e.coli alkaline phosphatase mutant in complex with a phosphorylated peptide
S 3.1 1e2sP Crystal structure of an arylsulfatase a mutant c69a
S 3.1 1ei6A Crystal structure of phosphonoacetate hydrolase complexed with phosphonoformate
S 3.1 1ejjA Crystal structural analysis of phosphoglycerate mutase cocrystallized with 3-phosphoglycerate
S 3.1 1jchA Crystal structure of colicin e3 in complex with its immunity protein
S 3.1
2
1n2lA Crystal structure of a covalent intermediate of endogenous human arylsulfatase a
S 3.1 2ifyA Structure of bacillus anthracis cofactor-independent phosphoglucerate mutase
S 3.1 2j6bA Crystal structure of afv3-109, a highly conserved protein from crenarchaeal viruses
S 3.1 2j6cA Crystal structure of afv3-109, a highly conserved protein from crenarchaeal viruses
S 3.1 2j85A B116 of sulfolobus turreted icosahedral virus (stiv)
S 3.1 2qqdC N47a mutant of pyruvoyl-dependent arginine decarboxylase from methanococcus jannashii
S 3.1
1
2vqrA Crystal structure of a phosphonate monoester hydrolase from rhizobium leguminosarum: a new member of the alkaline phosphatase superfamily
S 3.1 2wcuA Crystal structure of mammalian fucu
S 3.1 3a52A Crystal structure of cold-active alkailne phosphatase from psychrophile shewanella sp.
S 3.1 3b5qA Crystal structure of a putative sulfatase (np_810509.1) from bacteroides thetaiotaomicron vpi-5482 at 2.40 a resolution
S 3.1 1e1zP Crystal structure of an arylsulfatase a mutant c69s
S 3.1 3mfbA Crystal structure of the s-type pyocin domain of eca1669 protein from erwinia carotovora, northeast structural genomics consortium target ewr82c
S 3.1 3p12A Crystal structure of d-ribose pyranase sa240
S 3.1 3qtdA Crystal structure of putative modulator of gyrase (pmba) from pseudomonas aeruginosa pao1
S 3.1
2
4kjdA Ratintestinal ap expressed in e. coli
S 3.1
1
4lr7A Phosphopentomutase s154a variant
S 3.1
1
4lraA Phosphopentomutase s154g variant
S 3.1
3
4mhxA Crystal structure of sulfamidase
S 3.1
2
4mhxB Crystal structure of sulfamidase
S 3.1
1
4mivA Crystal structure of sulfamidase, crystal form l
S 3.1
1
4mivB Crystal structure of sulfamidase, crystal form l
S 3.1
2
4mivG Crystal structure of sulfamidase, crystal form l
S 3.1 4my4A Crystal structure of phosphoglycerate mutase from staphylococcus aureus.
S 3.1
1
4n7tA Crystal structure of phosphorylated phosphopentomutase from streptococcus mutans
S 3.1 4nwxA Crystal structure of phosphoglycerate mutase from staphylococcus aureus in 2-phosphoglyceric acid bound form
How to cite
KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling