3L4OC

Crystal structure of the maug/pre-methylamine dehydrogenase complex after treatment with hydrogen peroxide
Warning
  • Chain breaks within knot 31 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
Note, that the numbers in the matrix denote the consecutive residues in the loop, not the index of amino acids in the chain!
Knot K 1x +31

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Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
+ 31 29-87 59 1-28, 88-98 28 11 knot
Fingerprint Knot forming loop Loop type
K +31
Chain closureThr7 <-> Ser131
... Trp108 <-> Trq57 ... Cys29 <-> Cys61 ... Cys88 <-> Cys23 ... Thr7		 probabilistic
Chain Sequence
TDPRAKWVPQDNDIQACDYWRHCSIDGNICDCSGGSLTNCPPGTKLATAS-VASCYNPTDGQSYLIAYRDCCGYNVSGRCPCLNTEGELPVYRPEFANDIIWCFGAEDDAMTYHCTISPIVGKAS
sequence length 125
structure length 124
publication title In crystallo posttranslational modification within a MauG/pre-methylamine dehydrogenase complex.
pubmed doi rcsb
molecule tags Oxidoreductase/electron transport
molecule keywords Methylamine utilization protein mauG
source organism Paracoccus denitrificans
missing residues 51
total genus Genus: 32
ec nomenclature ec 1.4.99.3: Transferred entry: 1.4.9.1.
pdb deposition date 2009-12-21
KnotProt deposition date 2018-10-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF02975 Me-amine-dh_L Methylamine dehydrogenase, L chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.30.10 Mainly Beta Sandwich Electron Transport Ethylamine Dehydrogenase Electron Transport Ethylamine Dehydrogenase 3l4oC00
2.60.30.10 Mainly Beta Sandwich Electron Transport Ethylamine Dehydrogenase Electron Transport Ethylamine Dehydrogenase 3l4oC00
2AGXD 2IAAB 2OJYD 2HXCD 2IUPD 2BBKL 2AH0D 2IUQD 2Q7QD 2HJ4D 2I0TD 2HKMD 3L4OC 2MTAL 2I0SD 2HJBD 2HKRD 2J55L 2GC4B 2MADL 2OIZD 1MDAM 2IUVD 2AGYD 2GC7B 1MG2B 2IURD 2J56L 2AH1D 2H3XB 2OK4D 2AGLD 2J57K 2AGWD 1MG3B 2H47B 3C75L
chains in the KnotProt database with same CATH superfamily
2AGXD 2IAAB 2OJYD 2HXCD 2IUPD 2BBKL 2AH0D 2IUQD 2Q7QD 2HJ4D 2I0TD 2HKMD 3L4OC 2MTAL 2I0SD 2HJBD 2HKRD 2J55L 2GC4B 2MADL 2OIZD 1MDAM 2IUVD 2AGYD 2GC7B 1MG2B 2IURD 2J56L 2AH1D 2H3XB 2OK4D 2AGLD 2J57K 2AGWD 1MG3B 2H47B 3C75L
chains in the KnotProt database with same CATH topology
2AGXD 2IAAB 2OJYD 2HXCD 2IUPD 2BBKL 2AH0D 2IUQD 2Q7QD 2HJ4D 2I0TD 2HKMD 3L4OC 2MTAL 2I0SD 2HJBD 2HKRD 2J55L 2GC4B 2MADL 2OIZD 1MDAM 2IUVD 2AGYD 2GC7B 1MG2B 2IURD 2J56L 2AH1D 2H3XB 2OK4D 2AGLD 2J57K 2AGWD 1MG3B 2H47B 3C75L
chains in the KnotProt database with same CATH homology

  
#chains in the KnotProt database with same CATH superfamily
 2AGX D;  2IAA B;  2OJY D;  2HXC D;  2IUP D;  2BBK L;  2AH0 D;  2IUQ D;  2Q7Q D;  2HJ4 D;  2I0T D;  2HKM D;  3L4O C;  2MTA L;  2I0S D;  2HJB D;  2HKR D;  2J55 L;  2GC4 B;  2MAD L;  2OIZ D;  1MDA M;  2IUV D;  2AGY D;  2GC7 B;  1MG2 B;  2IUR D;  2J56 L;  2AH1 D;  2H3X B;  2OK4 D;  2AGL D;  2J57 K;  2AGW D;  1MG3 B;  2H47 B;  3C75 L; 
#chains in the KnotProt database with same CATH topology
 2AGX D;  2IAA B;  2OJY D;  2HXC D;  2IUP D;  2BBK L;  2AH0 D;  2IUQ D;  2Q7Q D;  2HJ4 D;  2I0T D;  2HKM D;  3L4O C;  2MTA L;  2I0S D;  2HJB D;  2HKR D;  2J55 L;  2GC4 B;  2MAD L;  2OIZ D;  1MDA M;  2IUV D;  2AGY D;  2GC7 B;  1MG2 B;  2IUR D;  2J56 L;  2AH1 D;  2H3X B;  2OK4 D;  2AGL D;  2J57 K;  2AGW D;  1MG3 B;  2H47 B;  3C75 L; 
#chains in the KnotProt database with same CATH homology
 2AGX D;  2IAA B;  2OJY D;  2HXC D;  2IUP D;  2BBK L;  2AH0 D;  2IUQ D;  2Q7Q D;  2HJ4 D;  2I0T D;  2HKM D;  3L4O C;  2MTA L;  2I0S D;  2HJB D;  2HKR D;  2J55 L;  2GC4 B;  2MAD L;  2OIZ D;  1MDA M;  2IUV D;  2AGY D;  2GC7 B;  1MG2 B;  2IUR D;  2J56 L;  2AH1 D;  2H3X B;  2OK4 D;  2AGL D;  2J57 K;  2AGW D;  1MG3 B;  2H47 B;  3C75 L;
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similar chains in the KnotProt database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the KnotProt database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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