Found 52 chains in Knotoided chains table. Displaying 1 - 52. Applied filters: Probabilistic

Search results query: topological notation for knotoids: S 2.1

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#pdbid|chain|deposition date|is S/K-not|(slip)knot types;
      
  6tys|A|2019-10-24|S|2.1;
  6dc5|A|2019-09-17|S|2.1;
  6rvy|A|2019-09-11|S|2.1;
  6eah|A|2019-09-08|S|2.1;
  6ean|F|2019-09-08|S|2.1;
  6o0h|A|2019-05-11|S|2.1;
  6acd|A|2018-10-02|S|2.1;
  5tdl|A|2018-09-14|S|2.1;
  5tdg|A|2018-09-13|S|2.1;
  5udc|A|2018-09-13|S|2.1;
  5ea8|F|2018-09-12|S|2.1;
  5ea4|F|2018-09-12|S|2.1;
  5c69|A|2018-09-12|S|2.1;
  5ea3|F|2018-09-12|S|2.1;
  5ea5|F|2018-09-12|S|2.1;
  1vlf|M|2018-06-26|S|2.1;
  5khu|T|2018-06-12|S|2.1;
  4zyp|A|2018-06-11|S|2.1;
  1woi|A|2018-06-11|S|2.1;
  1woh|A|2018-06-11|S|2.1;
  1wog|A|2018-06-11|S|2.1;
  5w23|A|2018-06-11|S|2.1;
  5kww|F|2018-06-11|S|2.1;
  5k6g|F|2018-06-11|S|2.1;
  5k6c|F|2018-06-11|S|2.1;
  5c50|B|2018-06-11|S|2.1;
  3rfy|A|2018-06-11|S|2.1;
  1ki3|A|2018-06-11|S|2.1;
  1ki4|A|2018-06-11|S|2.1;
  1of1|A|2018-06-11|S|2.1;
  1pgi|A|2018-06-11|S|2.1;
  2b9b|A|2018-06-11|S|2.1;
  2v64|A|2018-06-11|S|2.1;
  2x4i|A|2018-06-11|S|2.1;
  3fsg|A|2018-06-11|S|2.1;
  3idd|A|2018-06-11|S|2.1;
  3kd8|A|2018-06-11|S|2.1;
  3nip|A|2018-06-11|S|2.1;
  3niq|A|2018-06-11|S|2.1;
  1gq6|A|2018-06-11|S|2.1;
  3tx0|A|2018-06-11|S|2.1;
  4aez|B|2018-06-11|S|2.1;
  4bin|A|2018-06-11|S|2.1;
  4dz4|A|2018-06-11|S|2.1;
  4el9|A|2018-06-11|S|2.1;
  4gue|A|2018-06-11|S|2.1;
  4ivp|A|2018-06-11|S|2.1;
  4j7h|A|2018-06-11|S|2.1;
  4kay|A|2018-06-11|S|2.1;
  4lr2|A|2018-06-11|S|2.1;
  4o6b|A|2018-06-11|S|2.1;
  4tzo|A|2018-06-11|S|2.1;
Knotoid types pdb Title
S 2.1
1
6tysA A potent cross-neutralizing antibody targeting the fusion glycoprotein inhibits nipah virus and hendra virus infection
S 2.1
1
6dc5A Rsv prefusion f in complex with am22 fab
S 2.1
3
6rvyA Inward-open structure of the asct2 (slc1a5) mutant c467r in absence of substrate
S 2.1
1
6eahA Crystal structure of human respiratory syncytial virus fusion glycoprotein inhibitor escape variant k394r-s398l stabilized in the prefusion state
S 2.1
1
6eanF Crystal structure of human respiratory syncytial virus fusion glycoprotein inhibitor escape variant f488i stabilized in the prefusion state
S 2.1
3
6o0hA Cryo-em structure of human atp-citrate lyase in complex with inhibitor ndi-091143
S 2.1
3
6acdA Trypsin-cleaved and low ph-treated sars-cov spike glycoprotein and ace2 complex, ace2-free conformation with one rbd in up conformation
S 2.1 5tdlA Crystal structure of prefusion-stabilized bovine rsv fusion glycoprotein (single-chain ds2-v1 variant: strain 391-2 sc9 ds-cav1 q98c q361c)
S 2.1
1
5tdgA Crystal structure of prefusion-stabilized bovine rsv f (ds-cav1 variant: strain atue51908)
S 2.1
1
5udcA Crystal structure of rsv f a2 bound to medi8897
S 2.1
1
5ea8F Crystal structure of prefusion rsv f glycoprotein fusion inhibitor resistance mutant d489y
S 2.1
1
5ea4F Crystal structure of inhibitor jnj-49153390 in complex with prefusion rsv f glycoprotein
S 2.1
1
5c69A Crystal structure of prefusion-stabilized rsv f variant pr-dm
S 2.1
1
5ea3F Crystal structure of inhibitor jnj-2408068 in complex with prefusion rsv f glycoprotein
S 2.1
1
5ea5F Crystal structure of inhibitor tmc-353121 in complex with prefusion rsv f glycoprotein
S 2.1 1vlfM Crystal structure of pyrogallol-phloroglucinol transhydroxylase from pelobacter acidigallici complexed with inhibitor 1,2,4,5-tetrahydroxy-benzene
S 2.1
1
5khuT Model of human anaphase-promoting complex/cyclosome (apc15 deletion mutant), in complex with the mitotic checkpoint complex (apc/c-cdc20-mcc) based on cryo em data at 4.8 angstrom resolution
S 2.1
1
4zypA Crystal structure of motavizumab and quaternary-specific rsv-neutralizing human antibody am14 in complex with prefusion rsv f glycoprotein
S 2.1 1woiA Crystal structure of agmatinase reveals structural conservation and inhibition mechanism of the ureohydrolase superfamily
S 2.1 1wohA Crystal structure of agmatinase reveals structural conservation and inhibition mechanism of the ureohydrolase superfamily
S 2.1 1wogA Crystal structure of agmatinase reveals structural conservation and inhibition mechanism of the ureohydrolase superfamily
S 2.1
1
5w23A Crystal structure of rsv f in complex with 5c4 fab
S 2.1
1
5kwwF Crystal structure of inhibitor jnj-53718678 in complex with prefusion rsv f glycoprotein
S 2.1 5k6gF Crystal structure of prefusion-stabilized rsv f single-chain 9-24 ds-cav1 variant.
S 2.1 5k6cF Crystal structure of prefusion-stabilized rsv f single-chain 9-10 ds-cav1 variant.
S 2.1 5c50B Crystal structure of the complex of human atg101-atg13 horma domain
S 2.1 3rfyA Crystal structure of arabidopsis thaliana cyclophilin 38 (atcyp38)
S 2.1
5
1ki3A Crystal structure of thymidine kinase from herpes simplex virus type i complexed with penciclovir
S 2.1
1
1ki4A Crystal structure of thymidine kinase from herpes simplex virus type i complexed with 5-bromothienyldeoxyuridine
S 2.1
2
1of1A Kinetics and crystal structure of the herpes simplex virus type 1 thymidine kinase interacting with (south)-methanocarba-thymidine
S 2.1 1pgiA Crystallographic structure analysis of glucose 6-phosphate isomerase at 3.5 angstroms resolution
S 2.1 2b9bA Structure of the parainfluenza virus 5 f protein in its metastable, pre-fusion conformation
S 2.1 2v64A Crystallographic structure of the conformational dimer of the spindle assembly checkpoint protein mad2.
S 2.1 2x4iA Orf 114a from sulfolobus islandicus rudivirus 1
S 2.1
2
3fsgA Crystal structure of alpha/beta superfamily hydrolase from oenococcus oeni psu-1
S 2.1
1
3iddA Cofactor-independent phosphoglycerate mutase from thermoplasma acidophilum dsm 1728
S 2.1
1
3kd8A Cofactor-independent phosphoglycerate mutase from thermoplasma acidophilum dsm 1728
S 2.1 3nipA Crystal structure of pseudomonas aeruginosa guanidinopropionase complexed with 1,6-diaminohexane
S 2.1 3niqA Crystal structure of pseudomonas aeruginosa guanidinopropionase
S 2.1 1gq6A Proclavaminate amidino hydrolase from streptomyces clavuligerus
S 2.1 3tx0A Unphosphorylated bacillus cereus phosphopentomutase in a p212121 crystal form
S 2.1
1
4aezB Crystal structure of mitotic checkpoint complex
S 2.1
4
4binA Crystal structure of the e. coli n-acetylmuramoyl-l-alanine amidase amic
S 2.1
1
4dz4A X-ray crystal structure of a hypothetical agmatinase from burkholderia thailandensis
S 2.1
1
4el9A Structure of n-terminal kinase domain of rsk2 with afzelin
S 2.1
2
4gueA Structure of n-terminal kinase domain of rsk2 with flavonoid glycoside quercitrin
S 2.1
2
4ivpA Crystal structure of thymidine kinase from herpes simplex virus type 1 in complex with in51/20
S 2.1
2
4j7hA Crystal structure of evaa, a 2,3-dehydratase in complex with dtdp-benzene and dtdp-rhamnose
S 2.1
3
4kayA Structure of the soluble domain of lipooligosaccharide phosphoethanolamine transferase a from neisseria meningitidis - complex with zn
S 2.1 4lr2A Crystal structure of human enpp4 (apo)
S 2.1
1
4o6bA Dengue type2 virus non-structural protein 1 (ns1) form 1 crystal
S 2.1 4tzoA Structure of c. elegans htp-1 bound to him-3 closure motif
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KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling