1R4NB

Appbp1-uba3-nedd8, an e1-ubiquitin-like protein complex with atp
Cysteine knot
Loop Piercing
view details
202-c-343-b-346-c-346 199-b-343
Chain Sequence
DWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMATIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATN----RTLYLQSVTSIEERTRKELGL-------VDGQEAVADVTTPQTVL-FKLHFT
sequence length 430
structure length 418
publication title The structure of the APPBP1-UBA3-NEDD8-ATP complex reveals the basis for selective ubiquitin-like protein activation by an E1.
pubmed doi rcsb
molecule tags Cell cycle
molecule keywords amyloid beta precursor protein-binding protein 1
source organism Homo sapiens
missing residues 374-377, 395-401, 412
ec nomenclature
pdb deposition date 2003-10-07
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.10.520 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 1r4nB02
3.10.20.260 Alpha Beta Roll Ubiquitin-like (UB roll) Ubiquitin activating enzymes (Uba3). Chain: B, domain 3 1r4nB03
3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like Domain 1r4nB01
1YVEI 1YRLA 3FR8A 1R4MB 1R4NB 3FR7A 1QMGA
chains in the KnotProt database with same CATH superfamily
3VTKA 4IVPA 3FR8A 1JS1X 1DBIA 1YH1A 2XTJA 3L06A 3M4NA 1GKUB 4IVRA 1KI8A 3KZCA 1QMGA 3M5DA 1E2IA 3L02A 1E2JA 2G7MC 1KI7A 4JBYA 3RDPA 1P72A 1LNSA 3KZNA 3KZMA 3L04A 1F48A 1P75A 1QHIA 1E2NA 1KI2A 2KI5A 3FSGA 1KIMA 1KI6B 1YRLA 1P6XA 1P73A 3KZKA 3L05A 1YVEI 1P7CA 1VTKA 3M4JA 1E2KA 4IVQA 2FG6C 1E2HA 3F0TA 1KI4A 1E2PA 1R4MB 1KI6A 3M5CA 1OF1A 1II9A 1R4NB 3KZOA 1E2LA 1KI3A 1OSNA 2VTKA 3FR7A 4JBXA 1E2MA
chains in the KnotProt database with same CATH topology
1YVEI 1YRLA 3FR8A 1R4MB 1R4NB 3FR7A 1QMGA
chains in the KnotProt database with same CATH homology


 
#chains in the KnotProt database with same CATH superfamily
 1YVE I;  1YRL A;  3FR8 A;  1R4M B;  1R4N B;  3FR7 A;  1QMG A; 
#chains in the KnotProt database with same CATH topology
 3VTK A;  4IVP A;  3FR8 A;  1JS1 X;  1DBI A;  1YH1 A;  2XTJ A;  3L06 A;  3M4N A;  1GKU B;  4IVR A;  1KI8 A;  3KZC A;  1QMG A;  3M5D A;  1E2I A;  3L02 A;  1E2J A;  2G7M C;  1KI7 A;  4JBY A;  3RDP A;  1P72 A;  1LNS A;  3KZN A;  3KZM A;  3L04 A;  1F48 A;  1P75 A;  1QHI A;  1E2N A;  1KI2 A;  2KI5 A;  3FSG A;  1KIM A;  1KI6 B;  1YRL A;  1P6X A;  1P73 A;  3KZK A;  3L05 A;  1YVE I;  1P7C A;  1VTK A;  3M4J A;  1E2K A;  4IVQ A;  2FG6 C;  1E2H A;  3F0T A;  1KI4 A;  1E2P A;  1R4M B;  1KI6 A;  3M5C A;  1OF1 A;  1II9 A;  1R4N B;  3KZO A;  1E2L A;  1KI3 A;  1OSN A;  2VTK A;  3FR7 A;  4JBX A;  1E2M A; 
#chains in the KnotProt database with same CATH homology
 1YVE I;  1YRL A;  3FR8 A;  1R4M B;  1R4N B;  3FR7 A;  1QMG A; 
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similar chains in the KnotProt database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the KnotProt database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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