3FSGA

Crystal structure of alpha/beta superfamily hydrolase from oenococcus oeni psu-1
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 82-216 135 1-1, 245-267 2-81, 217-244 1 23 slipknot
Chain Sequence
MKEYLTRSNISYFSIGSGTPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISPSTSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNENGEIVLLNRTGHNLMIDQREAVGFHFDLFLDELNS
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
2.1 24-213 190 1-23 222-267 214-221 23 46 slipknot
view details
2.1 24-241 218 1-23 250-267 242-249 23 18 slipknot
view details
2.1 91-213 123 1-29, 221-267 30-90, 214-220 29 47 slipknot
view details
2.1 88-241 154 1-61, 249-267 62-87, 242-248 61 19 slipknot
sequence length 267
structure length 267
publication title Crystal structure of alpha/beta superfamily hydrolase from Oenococcus oeni PSU-1
rcsb
molecule tags Hydrolase
molecule keywords Alpha/beta superfamily hydrolase
source organism Oenococcus oeni
total genus Genus: 83
ec nomenclature
pdb deposition date 2009-01-09
KnotProt deposition date 2014-07-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF12697 Abhydrolase_6 Alpha/beta hydrolase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.50.1820 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Rossmann fold 3fsgA00
3FSGA 1LNSA
chains in the KnotProt database with same CATH superfamily
3VTKA 4IVPA 3FR8A 1JS1X 1DBIA 1YH1A 2XTJA 3L06A 3M4NA 1GKUB 4IVRA 1KI8A 3KZCA 1QMGA 3M5DA 1E2IA 3L02A 1E2JA 2G7MC 1KI7A 4JBYA 3RDPA 1P72A 1LNSA 3KZNA 3KZMA 3L04A 1F48A 1P75A 1QHIA 1E2NA 1KI2A 2KI5A 3FSGA 1KIMA 1KI6B 1YRLA 1P6XA 1P73A 3KZKA 3L05A 1YVEI 1P7CA 1VTKA 3M4JA 1E2KA 4IVQA 2FG6C 1E2HA 3F0TA 1KI4A 1E2PA 1R4MB 1KI6A 3M5CA 1OF1A 1II9A 3KZOA 1R4NB 1E2LA 1KI3A 1OSNA 2VTKA 3FR7A 4JBXA 1E2MA
chains in the KnotProt database with same CATH topology
1JS1X 1YH1A 2XTJA 3L06A 3M4NA 1GKUB 3KZCA 3M5DA 3L02A 2G7MC 3KZMA 1LNSA 3KZNA 3L04A 3FSGA 3L05A 3KZKA 3M4JA 2FG6C 3M5CA 3KZOA 1DBIA
chains in the KnotProt database with same CATH homology


 
#chains in the KnotProt database with same CATH superfamily
 3FSG A;  1LNS A; 
#chains in the KnotProt database with same CATH topology
 3VTK A;  4IVP A;  3FR8 A;  1JS1 X;  1DBI A;  1YH1 A;  2XTJ A;  3L06 A;  3M4N A;  1GKU B;  4IVR A;  1KI8 A;  3KZC A;  1QMG A;  3M5D A;  1E2I A;  3L02 A;  1E2J A;  2G7M C;  1KI7 A;  4JBY A;  3RDP A;  1P72 A;  1LNS A;  3KZN A;  3KZM A;  3L04 A;  1F48 A;  1P75 A;  1QHI A;  1E2N A;  1KI2 A;  2KI5 A;  3FSG A;  1KIM A;  1KI6 B;  1YRL A;  1P6X A;  1P73 A;  3KZK A;  3L05 A;  1YVE I;  1P7C A;  1VTK A;  3M4J A;  1E2K A;  4IVQ A;  2FG6 C;  1E2H A;  3F0T A;  1KI4 A;  1E2P A;  1R4M B;  1KI6 A;  3M5C A;  1OF1 A;  1II9 A;  3KZO A;  1R4N B;  1E2L A;  1KI3 A;  1OSN A;  2VTK A;  3FR7 A;  4JBX A;  1E2M A; 
#chains in the KnotProt database with same CATH homology
 1JS1 X;  1YH1 A;  2XTJ A;  3L06 A;  3M4N A;  1GKU B;  3KZC A;  3M5D A;  3L02 A;  2G7M C;  3KZM A;  1LNS A;  3KZN A;  3L04 A;  3FSG A;  3L05 A;  3KZK A;  3M4J A;  2FG6 C;  3M5C A;  3KZO A;  1DBI A; 
...loading similar chains, please wait...
similar chains in the KnotProt database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the KnotProt database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling