3L02 | KnotProt

Genus: 128

Knot K +3₁

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					Knot core range	Knot core length	Knot tails range	Slipknot tails range	Slipknot loops range	N-end length	C-end length	Type
view details				+3₁	174-251	78	1-173, 252-332			173	81	knot

Chain Sequence

LKHFLNTQDWSRAELDALLTQAALFKRNKLGSELKGKSIALVFFNPSMRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFNLGTVMDGDTAEHIAEVARVLGRYVDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVPVINMETITHPCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTNNGVFSHCLPLRRNVKATDAVMDSPNCIAIDEAENRLHVQKAIMAALV

Whole chain analysis

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Subchain analysis

Knotoid cutoff: 0.5

Knotoid matrix content: 1

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		Knot core range	Knot core length	Knot tails range	Slipknot tails range	Slipknot loops range	N-end length	C-end length	Type
view details	3.1	174-251	78	1-173, 252-332			173	81	knot
view details	2.1	65-248	184		1-7, 252-332	8-64, 249-251	7	81	slipknot
view details	2.1	170-248	79		1-64, 252-332	65-169, 249-251	64	81	slipknot
view details	2.1	175-271	97		1-173, 282-332	174-174, 272-281	173	51	slipknot
view details	3.1	175-298	124		1-173, 309-332	174-174, 299-308	173	24	slipknot

sequence length	332
structure length	332
publication title	A single mutation in the active site swaps the substrate specificity of N-acetyl-L-ornithine transcarbamylase and N-succinyl-L-ornithine transcarbamylase. pubmed doi rcsb
molecule tags	Transferase
molecule keywords	N-acetylornithine carbamoyltransferase
source organism	Xanthomonas campestris pv. campestris
total genus	Genus: 128
ec nomenclature	ec 2.1.3.9: N-acetylornithine carbamoyltransferase.
pdb deposition date	2009-12-09
KnotProt deposition date	2014-07-31

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF00185	OTCace	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.40.50.1370	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Rossmann fold	3l02A01
3.40.50.1370	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Rossmann fold	3l02A02

3M4JA 3KZOA 3M5CA 2G7MC 3L02A 3KZMA 3KZCA 3L04A 3M4NA 2FG6C 1YH1A 1JS1X 3KZKA 3M5DA 3KZNA 3L06A 3L05A
chains in the KnotProt database with same CATH superfamily

1P75A 3KZOA 1F48A 2VTKA 1KI3A 1II9A 3KZCA 3L04A 3M4NA 1OF1A 1KI2A 1KI6A 3M5DA 2XTJA 1KIMA 1E2LA 1E2JA 4IVRA 3FR8A 1E2NA 1P72A 1P7CA 3L02A 1KI6B 1GKUB 1YH1A 2FG6C 3RDPA 1JS1X 3KZKA 1R4MB 1KI4A 3FR7A 4JBXA 1E2HA 1OSNA 1P73A 3FSGA 1VTKA 3M5CA 3M4JA 1KI7A 1P6XA 3KZMA 1YVEI 3VTKA 1DBIA 1E2PA 3L06A 1QMGA 1E2IA 4IVPA 1QHIA 2G7MC 1R4NB 1E2MA 3KZNA 1YRLA 3F0TA 4JBYA 2KI5A 1E2KA 4IVQA 1LNSA 1KI8A 3L05A
chains in the KnotProt database with same CATH topology

3KZOA 3KZCA 3L04A 3M4NA 3M5DA 2XTJA 1LNSA 3L02A 1GKUB 2FG6C 1YH1A 1JS1X 3KZKA 3FSGA 3M5CA 3M4JA 3KZMA 1DBIA 3L06A 2G7MC 3KZNA 3L05A
chains in the KnotProt database with same CATH homology

#chains in the KnotProt database with same CATH superfamily
 3M4J A;  3KZO A;  3M5C A;  2G7M C;  3L02 A;  3KZM A;  3KZC A;  3L04 A;  3M4N A;  2FG6 C;  1YH1 A;  1JS1 X;  3KZK A;  3M5D A;  3KZN A;  3L06 A;  3L05 A; 
#chains in the KnotProt database with same CATH topology
 1P75 A;  3KZO A;  1F48 A;  2VTK A;  1KI3 A;  1II9 A;  3KZC A;  3L04 A;  3M4N A;  1OF1 A;  1KI2 A;  1KI6 A;  3M5D A;  2XTJ A;  1KIM A;  1E2L A;  1E2J A;  4IVR A;  3FR8 A;  1E2N A;  1P72 A;  1P7C A;  3L02 A;  1KI6 B;  1GKU B;  1YH1 A;  2FG6 C;  3RDP A;  1JS1 X;  3KZK A;  1R4M B;  1KI4 A;  3FR7 A;  4JBX A;  1E2H A;  1OSN A;  1P73 A;  3FSG A;  1VTK A;  3M5C A;  3M4J A;  1KI7 A;  1P6X A;  3KZM A;  1YVE I;  3VTK A;  1DBI A;  1E2P A;  3L06 A;  1QMG A;  1E2I A;  4IVP A;  1QHI A;  2G7M C;  1R4N B;  1E2M A;  3KZN A;  1YRL A;  3F0T A;  4JBY A;  2KI5 A;  1E2K A;  4IVQ A;  1LNS A;  1KI8 A;  3L05 A; 
#chains in the KnotProt database with same CATH homology
 3KZO A;  3KZC A;  3L04 A;  3M4N A;  3M5D A;  2XTJ A;  1LNS A;  3L02 A;  1GKU B;  2FG6 C;  1YH1 A;  1JS1 X;  3KZK A;  3FSG A;  3M5C A;  3M4J A;  3KZM A;  1DBI A;  3L06 A;  2G7M C;  3KZN A;  3L05 A;

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similar chains in the KnotProt database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

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#similar chains, but unknotted
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3L02A

Knot K +31

Chain Sequence

pfam database annotations

Knot K +3₁