1ALJA

Alkaline phosphatase mutant (h412n)
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 43-365 323 1-42 417-446 366-416 42 30 slipknot
Chain Sequence
MPVLENRAAQGDITAPGGARRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQENTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALGLK
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
2.1 22-363 342 1-21 369-446 364-368 21 78 slipknot
view details
3.1 44-372 329 1-43 411-446 373-410 43 36 slipknot
view details
3.1 42-410 369 1-41 415-446 411-414 41 32 slipknot
view details
2.1 40-364 325 1-28, 370-446 29-39, 365-369 28 77 slipknot
view details
3.1 43-411 369 1-41, 415-446 42-42, 412-414 41 32 slipknot
sequence length 446
structure length 446
publication title Escherichia coli alkaline phosphatase: X-ray structural studies of a mutant enzyme (His-412-->Asn) at one of the catalytically important zinc binding sites.
pubmed rcsb
molecule tags Hydrolase (phosphoric monoester)
molecule keywords ALKALINE PHOSPHATASE
source organism Escherichia coli
total genus Genus: 164
ec nomenclature ec 3.1.3.1: Alkaline phosphatase.
pdb deposition date 1995-06-02
KnotProt deposition date 2014-07-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00245 Alk_phosphatase Alkaline phosphatase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 1aljA00
1E1ZP 3DYCA 1AJCA 1Y6VA 4FDIA 1KH9A 3BDFA 3MK1A 3NVLA 1ANJA 1KH5A 2ANHA 3T02A 1O99A 1E3CP 1Y7AA 1ZEBA 1EW2A 2GA3A 1KHJA 3IGYB 1N2KA 3M8ZA 3SZYA 3BDGA 3TWZA 3BDGB 3TX0A 3UN3A 1EI6A 2IFYA 1ELZA 1ANIA 3CMRA 3UO0A 3IGZB 3BDHA 4FDJA 1K7HA 1KHNA 1ZEFA 1SHNA 3UNYA 1KH4A 3MK2A 1ED9A 1ALIA 1AJBA 3T00A 1EW9A 2G9YA 3UN5A 1ELXA 1P49A 3DPCA 1AJAA 3M8YA 1N2LA 1B8JA 1EQJA 1ALKA 1FSUA 2QZUA 3ED4A 1URAA 1ZEDA 1SHQA 1AJDA 3M7VA 1ED8A 1KHKA 1ALJA 1ELYA 1E33P 3T01A 1EJJA 1KHLA 2GLQA 3OT9A 3M8WA 3MK0A 1HDHA 3UN2A 1E2SP 3SZZA 1KH7A 1URBA 1HJKA 1AUKA 1O98A 1HQAA 1EW8A
chains in the KnotProt database with same CATH superfamily
1E1ZP 3DYCA 1AJCA 1Y6VA 4FDIA 1KH9A 3BDFA 3MK1A 3NVLA 1ANJA 1KH5A 2ANHA 3T02A 1O99A 1E3CP 1Y7AA 1ZEBA 1EW2A 2GA3A 1KHJA 3IGYB 1N2KA 3M8ZA 3SZYA 3BDGA 3TWZA 3BDGB 3TX0A 3UN3A 1EI6A 2IFYA 1ELZA 1ANIA 3CMRA 3UO0A 3IGZB 3BDHA 4FDJA 1K7HA 1KHNA 1ZEFA 1SHNA 3UNYA 1KH4A 3MK2A 1ED9A 1ALIA 1AJBA 3T00A 1EW9A 2G9YA 3UN5A 1ELXA 1P49A 3DPCA 1AJAA 3M8YA 1N2LA 1B8JA 1EQJA 1ALKA 1FSUA 2QZUA 3ED4A 1URAA 1ZEDA 1SHQA 1AJDA 3M7VA 1ED8A 1KHKA 1ALJA 1ELYA 1E33P 3T01A 1EJJA 1KHLA 2GLQA 3OT9A 3M8WA 3MK0A 1HDHA 3UN2A 1E2SP 3SZZA 1KH7A 1URBA 1HJKA 1AUKA 1O98A 1HQAA 1EW8A
chains in the KnotProt database with same CATH topology
1E1ZP 3DYCA 1AJCA 1Y6VA 4FDIA 1KH9A 3BDFA 3MK1A 3NVLA 1ANJA 1KH5A 2ANHA 3T02A 1O99A 1E3CP 1Y7AA 1ZEBA 1EW2A 2GA3A 1KHJA 3IGYB 1N2KA 3M8ZA 3SZYA 3BDGA 3TWZA 3BDGB 3TX0A 3UN3A 1EI6A 2IFYA 1ELZA 1ANIA 3CMRA 3UO0A 3IGZB 3BDHA 4FDJA 1K7HA 1KHNA 1ZEFA 1SHNA 3UNYA 1KH4A 3MK2A 1ED9A 1ALIA 1AJBA 3T00A 1EW9A 2G9YA 3UN5A 1ELXA 1P49A 3DPCA 1AJAA 3M8YA 1N2LA 1B8JA 1EQJA 1ALKA 1FSUA 2QZUA 3ED4A 1URAA 1ZEDA 1SHQA 1AJDA 3M7VA 1ED8A 1KHKA 1ALJA 1ELYA 1E33P 3T01A 1EJJA 1KHLA 2GLQA 3OT9A 3M8WA 3MK0A 1HDHA 3UN2A 1E2SP 3SZZA 1KH7A 1URBA 1HJKA 1AUKA 1O98A 1HQAA 1EW8A
chains in the KnotProt database with same CATH homology


 
#chains in the KnotProt database with same CATH superfamily
 1E1Z P;  3DYC A;  1AJC A;  1Y6V A;  4FDI A;  1KH9 A;  3BDF A;  3MK1 A;  3NVL A;  1ANJ A;  1KH5 A;  2ANH A;  3T02 A;  1O99 A;  1E3C P;  1Y7A A;  1ZEB A;  1EW2 A;  2GA3 A;  1KHJ A;  3IGY B;  1N2K A;  3M8Z A;  3SZY A;  3BDG A;  3TWZ A;  3BDG B;  3TX0 A;  3UN3 A;  1EI6 A;  2IFY A;  1ELZ A;  1ANI A;  3CMR A;  3UO0 A;  3IGZ B;  3BDH A;  4FDJ A;  1K7H A;  1KHN A;  1ZEF A;  1SHN A;  3UNY A;  1KH4 A;  3MK2 A;  1ED9 A;  1ALI A;  1AJB A;  3T00 A;  1EW9 A;  2G9Y A;  3UN5 A;  1ELX A;  1P49 A;  3DPC A;  1AJA A;  3M8Y A;  1N2L A;  1B8J A;  1EQJ A;  1ALK A;  1FSU A;  2QZU A;  3ED4 A;  1URA A;  1ZED A;  1SHQ A;  1AJD A;  3M7V A;  1ED8 A;  1KHK A;  1ALJ A;  1ELY A;  1E33 P;  3T01 A;  1EJJ A;  1KHL A;  2GLQ A;  3OT9 A;  3M8W A;  3MK0 A;  1HDH A;  3UN2 A;  1E2S P;  3SZZ A;  1KH7 A;  1URB A;  1HJK A;  1AUK A;  1O98 A;  1HQA A;  1EW8 A; 
#chains in the KnotProt database with same CATH topology
 1E1Z P;  3DYC A;  1AJC A;  1Y6V A;  4FDI A;  1KH9 A;  3BDF A;  3MK1 A;  3NVL A;  1ANJ A;  1KH5 A;  2ANH A;  3T02 A;  1O99 A;  1E3C P;  1Y7A A;  1ZEB A;  1EW2 A;  2GA3 A;  1KHJ A;  3IGY B;  1N2K A;  3M8Z A;  3SZY A;  3BDG A;  3TWZ A;  3BDG B;  3TX0 A;  3UN3 A;  1EI6 A;  2IFY A;  1ELZ A;  1ANI A;  3CMR A;  3UO0 A;  3IGZ B;  3BDH A;  4FDJ A;  1K7H A;  1KHN A;  1ZEF A;  1SHN A;  3UNY A;  1KH4 A;  3MK2 A;  1ED9 A;  1ALI A;  1AJB A;  3T00 A;  1EW9 A;  2G9Y A;  3UN5 A;  1ELX A;  1P49 A;  3DPC A;  1AJA A;  3M8Y A;  1N2L A;  1B8J A;  1EQJ A;  1ALK A;  1FSU A;  2QZU A;  3ED4 A;  1URA A;  1ZED A;  1SHQ A;  1AJD A;  3M7V A;  1ED8 A;  1KHK A;  1ALJ A;  1ELY A;  1E33 P;  3T01 A;  1EJJ A;  1KHL A;  2GLQ A;  3OT9 A;  3M8W A;  3MK0 A;  1HDH A;  3UN2 A;  1E2S P;  3SZZ A;  1KH7 A;  1URB A;  1HJK A;  1AUK A;  1O98 A;  1HQA A;  1EW8 A; 
#chains in the KnotProt database with same CATH homology
 1E1Z P;  3DYC A;  1AJC A;  1Y6V A;  4FDI A;  1KH9 A;  3BDF A;  3MK1 A;  3NVL A;  1ANJ A;  1KH5 A;  2ANH A;  3T02 A;  1O99 A;  1E3C P;  1Y7A A;  1ZEB A;  1EW2 A;  2GA3 A;  1KHJ A;  3IGY B;  1N2K A;  3M8Z A;  3SZY A;  3BDG A;  3TWZ A;  3BDG B;  3TX0 A;  3UN3 A;  1EI6 A;  2IFY A;  1ELZ A;  1ANI A;  3CMR A;  3UO0 A;  3IGZ B;  3BDH A;  4FDJ A;  1K7H A;  1KHN A;  1ZEF A;  1SHN A;  3UNY A;  1KH4 A;  3MK2 A;  1ED9 A;  1ALI A;  1AJB A;  3T00 A;  1EW9 A;  2G9Y A;  3UN5 A;  1ELX A;  1P49 A;  3DPC A;  1AJA A;  3M8Y A;  1N2L A;  1B8J A;  1EQJ A;  1ALK A;  1FSU A;  2QZU A;  3ED4 A;  1URA A;  1ZED A;  1SHQ A;  1AJD A;  3M7V A;  1ED8 A;  1KHK A;  1ALJ A;  1ELY A;  1E33 P;  3T01 A;  1EJJ A;  1KHL A;  2GLQ A;  3OT9 A;  3M8W A;  3MK0 A;  1HDH A;  3UN2 A;  1E2S P;  3SZZ A;  1KH7 A;  1URB A;  1HJK A;  1AUK A;  1O98 A;  1HQA A;  1EW8 A; 
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similar chains in the KnotProt database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the KnotProt database (?% sequence similarity)
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#similar chains, but unknotted
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