1EI6 | KnotProt

Genus: 126

Slipknot S +3₁

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Help Knotting data interpretation Full screen

					Knot core range	Knot core length	Knot tails range	Slipknot tails range	Slipknot loops range	N-end length	C-end length	Type
view details				+3₁	24-240	217	1-23	376-406	241-375	23	31	slipknot

Chain Sequence

TNLISVNSRSYRLSSAPTIVICVDGCEQEYINQAIQAGQAPFLAELTGFGTVLTGDCVVPSFTNPNNLSIVTGAPPSVHGICGNFFFDQETQEEVLMNDAKYLRAPTILAEMAKAGQLVAVVTAKDKLRNLLGHQLKGICFSAEKADQVNLEEHGVENILARVGMPVPSVYSADLSEFVFAAGLSLLTNERPDFMYLSTTDYVQHKHAPGTPEANAFYAMMDSYFKRYHEQGAIVAITADHGMNAKTDAIGRPNILFLQDLLDAQYGAQRTRVLLPITDPYVVHHGALGSYATVYLRDAVPQRDAIDFLAGIAGVEAVLTRSQACQRFELPEDRIGDLVVLGERLTVLGSAADKHDLSGLTVPLRSHGGVSEQKVPLIFNRKLVGLD--GRLRNFDIIDLALNHLA

Whole chain analysis

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Subchain analysis

Knotoid cutoff: 0.5

Knotoid matrix content: 1

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Help Knotoid subchains data interpretation Full screen

		Knot core range	Knot core length	Knot tails range	Slipknot tails range	Slipknot loops range	N-end length	C-end length	Type
view details	3.1	22-240	219	1-21	368-404	241-367	21	37	slipknot
view details	3.1	22-367	346	1-21	372-404	368-371	21	33	slipknot
view details	3.1	21-371	351	1-20	374-404	372-373	20	31	slipknot

sequence length	406
structure length	404
publication title	Crystal structure of Phosphonoacetate Hydrolase complexed with phosphonoformate rcsb
molecule tags	Hydrolase
molecule keywords	PHOSPHONOACETATE HYDROLASE
source organism	Pseudomonas fluorescens
missing residues	388-389
total genus	Genus: 126
ec nomenclature	ec 3.11.1.2: Phosphonoacetate hydrolase.
pdb deposition date	2000-02-24
KnotProt deposition date	2014-07-31

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF01663	Phosphodiest	Type I phosphodiesterase / nucleotide pyrophosphatase

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.1360.110	Alpha Beta	2-Layer Sandwich	Gyrase A; domain 2	Domain 2, Phosphonoacetate Hydrolase	1ei6A02
3.40.720.10	Alpha Beta	3-Layer(aba) Sandwich	Alkaline Phosphatase, subunit A	Alkaline Phosphatase, subunit A	1ei6A01

1KH7A 2GLQA 3DYCA 3IGYB 3T01A 1KHNA 3T00A 1SHQA 3M8WA 1AJDA 1AJBA 1KH4A 1Y7AA 1AUKA 1ALKA 3M7VA 1B8JA 1ZEBA 3BDGB 3T02A 1EW8A 1Y6VA 3UN2A 1ELYA 1E3CP 3UN5A 1URBA 3TWZA 1E1ZP 1O98A 1HJKA 1ALIA 1E2SP 1EQJA 2G9YA 1KHJA 1O99A 3IGZB 3MK2A 1KHLA 1N2KA 1P49A 1ANIA 3SZYA 3M8YA 2QZUA 1ELZA 1EJJA 3OT9A 3UO0A 1K7HA 2GA3A 1N2LA 3UNYA 1AJCA 1ZEFA 2IFYA 3MK0A 1KH9A 3BDGA 1HDHA 1EW2A 3DPCA 1ALJA 1ED8A 1EI6A 2ANHA 3UN3A 3BDFA 3ED4A 1E33P 1EW9A 3SZZA 1KHKA 3NVLA 1ZEDA 1AJAA 1KH5A 1FSUA 3CMRA 3MK1A 3TX0A 1URAA 1ELXA 3M8ZA 1ANJA 1HQAA 1ED9A 4FDJA 3BDHA 4FDIA 1SHNA
chains in the KnotProt database with same CATH superfamily

#chains in the KnotProt database with same CATH superfamily
 1KH7 A;  2GLQ A;  3DYC A;  3IGY B;  3T01 A;  1KHN A;  3T00 A;  1SHQ A;  3M8W A;  1AJD A;  1AJB A;  1KH4 A;  1Y7A A;  1AUK A;  1ALK A;  3M7V A;  1B8J A;  1ZEB A;  3BDG B;  3T02 A;  1EW8 A;  1Y6V A;  3UN2 A;  1ELY A;  1E3C P;  3UN5 A;  1URB A;  3TWZ A;  1E1Z P;  1O98 A;  1HJK A;  1ALI A;  1E2S P;  1EQJ A;  2G9Y A;  1KHJ A;  1O99 A;  3IGZ B;  3MK2 A;  1KHL A;  1N2K A;  1P49 A;  1ANI A;  3SZY A;  3M8Y A;  2QZU A;  1ELZ A;  1EJJ A;  3OT9 A;  3UO0 A;  1K7H A;  2GA3 A;  1N2L A;  3UNY A;  1AJC A;  1ZEF A;  2IFY A;  3MK0 A;  1KH9 A;  3BDG A;  1HDH A;  1EW2 A;  3DPC A;  1ALJ A;  1ED8 A;  1EI6 A;  2ANH A;  3UN3 A;  3BDF A;  3ED4 A;  1E33 P;  1EW9 A;  3SZZ A;  1KHK A;  3NVL A;  1ZED A;  1AJA A;  1KH5 A;  1FSU A;  3CMR A;  3MK1 A;  3TX0 A;  1URA A;  1ELX A;  3M8Z A;  1ANJ A;  1HQA A;  1ED9 A;  4FDJ A;  3BDH A;  4FDI A;  1SHN A; 
#chains in the KnotProt database with same CATH topology
 1KH7 A;  2GLQ A;  3DYC A;  3IGY B;  3T01 A;  1KHN A;  3T00 A;  1SHQ A;  3M8W A;  1AJD A;  1AJB A;  1KH4 A;  1Y7A A;  1AUK A;  1ALK A;  3M7V A;  1B8J A;  1ZEB A;  3BDG B;  3T02 A;  1EW8 A;  1Y6V A;  3UN2 A;  1ELY A;  1E3C P;  3UN5 A;  1URB A;  3TWZ A;  1E1Z P;  1O98 A;  1HJK A;  1ALI A;  1E2S P;  1EQJ A;  2G9Y A;  1KHJ A;  1O99 A;  3IGZ B;  3MK2 A;  1KHL A;  1N2K A;  1P49 A;  1ANI A;  3SZY A;  3M8Y A;  2QZU A;  1ELZ A;  1EJJ A;  3OT9 A;  3UO0 A;  1K7H A;  2GA3 A;  1N2L A;  3UNY A;  1AJC A;  1ZEF A;  2IFY A;  3MK0 A;  1KH9 A;  3BDG A;  1HDH A;  1EW2 A;  3DPC A;  1ALJ A;  1ED8 A;  1EI6 A;  2ANH A;  3UN3 A;  3BDF A;  3ED4 A;  1E33 P;  1EW9 A;  3SZZ A;  1KHK A;  3NVL A;  1ZED A;  1AJA A;  1KH5 A;  1FSU A;  3CMR A;  3MK1 A;  3TX0 A;  1URA A;  1ELX A;  3M8Z A;  1ANJ A;  1HQA A;  1ED9 A;  4FDJ A;  3BDH A;  4FDI A;  1SHN A; 
#chains in the KnotProt database with same CATH homology
 1KH7 A;  2GLQ A;  3DYC A;  3IGY B;  3T01 A;  1KHN A;  3T00 A;  1SHQ A;  3M8W A;  1AJD A;  1AJB A;  1KH4 A;  1Y7A A;  1AUK A;  1ALK A;  3M7V A;  1B8J A;  1ZEB A;  3BDG B;  3T02 A;  1EW8 A;  1Y6V A;  3UN2 A;  1ELY A;  1E3C P;  3UN5 A;  1URB A;  3TWZ A;  1E1Z P;  1O98 A;  1HJK A;  1ALI A;  1E2S P;  1EQJ A;  2G9Y A;  1KHJ A;  1O99 A;  3IGZ B;  3MK2 A;  1KHL A;  1N2K A;  1P49 A;  1ANI A;  3SZY A;  3M8Y A;  2QZU A;  1ELZ A;  1EJJ A;  3OT9 A;  3UO0 A;  1K7H A;  2GA3 A;  1N2L A;  3UNY A;  1AJC A;  1ZEF A;  2IFY A;  3MK0 A;  1KH9 A;  3BDG A;  1HDH A;  1EW2 A;  3DPC A;  1ALJ A;  1ED8 A;  1EI6 A;  2ANH A;  3UN3 A;  3BDF A;  3ED4 A;  1E33 P;  1EW9 A;  3SZZ A;  1KHK A;  3NVL A;  1ZED A;  1AJA A;  1KH5 A;  1FSU A;  3CMR A;  3MK1 A;  3TX0 A;  1URA A;  1ELX A;  3M8Z A;  1ANJ A;  1HQA A;  1ED9 A;  4FDJ A;  3BDH A;  4FDI A;  1SHN A;

3SZYA 3SZZA 3T00A 3T01A 3T02A
similar chains in the KnotProt database (40% sequence similarity)

None
similar chains in the pdb database (40% sequence similarity)

#similar chains in the KnotProt database (40% sequence similarity)
3SZY A; 3SZZ A; 3T00 A; 3T01 A; 3T02 A; 
#similar chains, but unknotted

#similar chains in the pdb database (40% sequence similarity)

1EI6A

Slipknot S +31

Chain Sequence

pfam database annotations

Slipknot S +3₁