1KH7A

E. coli alkaline phosphatase mutant (d153gd330n)
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 41-363 323 1-40 414-444 364-413 40 31 slipknot
Chain Sequence
VLENRAAQGNITAPGGARRLTGDQTAALRNSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQGATPAALVAHVTSRKCYGPSKTSQKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAGEWQGKTLREEAEARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQNHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALGLK
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
2.1 39-362 324 1-38 370-444 363-369 38 75 slipknot
view details
3.1 44-365 322 1-43 383-444 366-382 43 62 slipknot
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3.1 44-382 339 1-43 407-444 383-406 43 38 slipknot
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3.1 44-406 363 1-43 412-444 407-411 43 33 slipknot
view details
2.1 39-411 373 1-38 416-444 412-415 38 29 slipknot
view details
2.1 40-411 372 1-38, 414-444 39-39, 412-413 38 31 slipknot
sequence length 444
structure length 444
publication title Artificial evolution of an enzyme active site: structural studies of three highly active mutants of Escherichia coli alkaline phosphatase.
pubmed doi rcsb
molecule tags Hydrolase
molecule keywords alkaline phosphatase
source organism Escherichia coli
total genus Genus: 151
ec nomenclature ec 3.1.3.1: Alkaline phosphatase.
pdb deposition date 2001-11-29
KnotProt deposition date 2014-07-31
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 1kh7A00
1E2SP 1URBA 1EQJA 1KH4A 3UN3A 3IGYB 1HDHA 4FDJA 1AJCA 1O98A 1ELXA 1KH7A 1N2KA 1AUKA 2G9YA 1E33P 2QZUA 1EJJA 3T02A 1ALIA 1ELZA 1SHNA 1ZEDA 3MK1A 1KHNA 1P49A 1E3CP 3ED4A 1AJAA 1ELYA 1B8JA 1FSUA 1KHKA 1ED8A 3M8YA 3BDGB 3TX0A 1KHLA 1KH5A 1KHJA 3DYCA 1AJDA 3MK0A 1ED9A 3T00A 1EI6A 3SZZA 3BDFA 1O99A 3CMRA 3UNYA 1URAA 1EW9A 3TWZA 3UN2A 2GLQA 1ANIA 1SHQA 1ALKA 3OT9A 1EW8A 1ZEFA 1AJBA 1K7HA 3BDHA 1HJKA 1HQAA 3UN5A 3DPCA 3IGZB 1ANJA 1N2LA 2IFYA 1Y6VA 1ZEBA 1Y7AA 3M8WA 3UO0A 3BDGA 2ANHA 2GA3A 3NVLA 1E1ZP 3MK2A 1EW2A 1ALJA 1KH9A 3M8ZA 3SZYA 3T01A 4FDIA 3M7VA
chains in the KnotProt database with same CATH superfamily
1E2SP 1URBA 1EQJA 1KH4A 3UN3A 3IGYB 1HDHA 4FDJA 1AJCA 1O98A 1ELXA 1KH7A 1N2KA 1AUKA 2G9YA 1E33P 2QZUA 1EJJA 3T02A 1ALIA 1ELZA 1SHNA 1ZEDA 3MK1A 1KHNA 1P49A 1E3CP 3ED4A 1AJAA 1ELYA 1B8JA 1FSUA 1KHKA 1ED8A 3M8YA 3BDGB 3TX0A 1KHLA 1KH5A 1KHJA 3DYCA 1AJDA 3MK0A 1ED9A 3T00A 1EI6A 3SZZA 3BDFA 1O99A 3CMRA 3UNYA 1URAA 1EW9A 3TWZA 3UN2A 2GLQA 1ANIA 1SHQA 1ALKA 3OT9A 1EW8A 1ZEFA 1AJBA 1K7HA 3BDHA 1HJKA 1HQAA 3UN5A 3DPCA 3IGZB 1ANJA 1N2LA 2IFYA 1Y6VA 1ZEBA 1Y7AA 3M8WA 3UO0A 3BDGA 2ANHA 2GA3A 3NVLA 1E1ZP 3MK2A 1EW2A 1ALJA 1KH9A 3M8ZA 3SZYA 3T01A 4FDIA 3M7VA
chains in the KnotProt database with same CATH topology
1E2SP 1URBA 1EQJA 1KH4A 3UN3A 3IGYB 1HDHA 4FDJA 1AJCA 1O98A 1ELXA 1KH7A 1N2KA 1AUKA 2G9YA 1E33P 2QZUA 1EJJA 3T02A 1ALIA 1ELZA 1SHNA 1ZEDA 3MK1A 1KHNA 1P49A 1E3CP 3ED4A 1AJAA 1ELYA 1B8JA 1FSUA 1KHKA 1ED8A 3M8YA 3BDGB 3TX0A 1KHLA 1KH5A 1KHJA 3DYCA 1AJDA 3MK0A 1ED9A 3T00A 1EI6A 3SZZA 3BDFA 1O99A 3CMRA 3UNYA 1URAA 1EW9A 3TWZA 3UN2A 2GLQA 1ANIA 1SHQA 1ALKA 3OT9A 1EW8A 1ZEFA 1AJBA 1K7HA 3BDHA 1HJKA 1HQAA 3UN5A 3DPCA 3IGZB 1ANJA 1N2LA 2IFYA 1Y6VA 1ZEBA 1Y7AA 3M8WA 3UO0A 3BDGA 2ANHA 2GA3A 3NVLA 1E1ZP 3MK2A 1EW2A 1ALJA 1KH9A 3M8ZA 3SZYA 3T01A 4FDIA 3M7VA
chains in the KnotProt database with same CATH homology


 
#chains in the KnotProt database with same CATH superfamily
 1E2S P;  1URB A;  1EQJ A;  1KH4 A;  3UN3 A;  3IGY B;  1HDH A;  4FDJ A;  1AJC A;  1O98 A;  1ELX A;  1KH7 A;  1N2K A;  1AUK A;  2G9Y A;  1E33 P;  2QZU A;  1EJJ A;  3T02 A;  1ALI A;  1ELZ A;  1SHN A;  1ZED A;  3MK1 A;  1KHN A;  1P49 A;  1E3C P;  3ED4 A;  1AJA A;  1ELY A;  1B8J A;  1FSU A;  1KHK A;  1ED8 A;  3M8Y A;  3BDG B;  3TX0 A;  1KHL A;  1KH5 A;  1KHJ A;  3DYC A;  1AJD A;  3MK0 A;  1ED9 A;  3T00 A;  1EI6 A;  3SZZ A;  3BDF A;  1O99 A;  3CMR A;  3UNY A;  1URA A;  1EW9 A;  3TWZ A;  3UN2 A;  2GLQ A;  1ANI A;  1SHQ A;  1ALK A;  3OT9 A;  1EW8 A;  1ZEF A;  1AJB A;  1K7H A;  3BDH A;  1HJK A;  1HQA A;  3UN5 A;  3DPC A;  3IGZ B;  1ANJ A;  1N2L A;  2IFY A;  1Y6V A;  1ZEB A;  1Y7A A;  3M8W A;  3UO0 A;  3BDG A;  2ANH A;  2GA3 A;  3NVL A;  1E1Z P;  3MK2 A;  1EW2 A;  1ALJ A;  1KH9 A;  3M8Z A;  3SZY A;  3T01 A;  4FDI A;  3M7V A; 
#chains in the KnotProt database with same CATH topology
 1E2S P;  1URB A;  1EQJ A;  1KH4 A;  3UN3 A;  3IGY B;  1HDH A;  4FDJ A;  1AJC A;  1O98 A;  1ELX A;  1KH7 A;  1N2K A;  1AUK A;  2G9Y A;  1E33 P;  2QZU A;  1EJJ A;  3T02 A;  1ALI A;  1ELZ A;  1SHN A;  1ZED A;  3MK1 A;  1KHN A;  1P49 A;  1E3C P;  3ED4 A;  1AJA A;  1ELY A;  1B8J A;  1FSU A;  1KHK A;  1ED8 A;  3M8Y A;  3BDG B;  3TX0 A;  1KHL A;  1KH5 A;  1KHJ A;  3DYC A;  1AJD A;  3MK0 A;  1ED9 A;  3T00 A;  1EI6 A;  3SZZ A;  3BDF A;  1O99 A;  3CMR A;  3UNY A;  1URA A;  1EW9 A;  3TWZ A;  3UN2 A;  2GLQ A;  1ANI A;  1SHQ A;  1ALK A;  3OT9 A;  1EW8 A;  1ZEF A;  1AJB A;  1K7H A;  3BDH A;  1HJK A;  1HQA A;  3UN5 A;  3DPC A;  3IGZ B;  1ANJ A;  1N2L A;  2IFY A;  1Y6V A;  1ZEB A;  1Y7A A;  3M8W A;  3UO0 A;  3BDG A;  2ANH A;  2GA3 A;  3NVL A;  1E1Z P;  3MK2 A;  1EW2 A;  1ALJ A;  1KH9 A;  3M8Z A;  3SZY A;  3T01 A;  4FDI A;  3M7V A; 
#chains in the KnotProt database with same CATH homology
 1E2S P;  1URB A;  1EQJ A;  1KH4 A;  3UN3 A;  3IGY B;  1HDH A;  4FDJ A;  1AJC A;  1O98 A;  1ELX A;  1KH7 A;  1N2K A;  1AUK A;  2G9Y A;  1E33 P;  2QZU A;  1EJJ A;  3T02 A;  1ALI A;  1ELZ A;  1SHN A;  1ZED A;  3MK1 A;  1KHN A;  1P49 A;  1E3C P;  3ED4 A;  1AJA A;  1ELY A;  1B8J A;  1FSU A;  1KHK A;  1ED8 A;  3M8Y A;  3BDG B;  3TX0 A;  1KHL A;  1KH5 A;  1KHJ A;  3DYC A;  1AJD A;  3MK0 A;  1ED9 A;  3T00 A;  1EI6 A;  3SZZ A;  3BDF A;  1O99 A;  3CMR A;  3UNY A;  1URA A;  1EW9 A;  3TWZ A;  3UN2 A;  2GLQ A;  1ANI A;  1SHQ A;  1ALK A;  3OT9 A;  1EW8 A;  1ZEF A;  1AJB A;  1K7H A;  3BDH A;  1HJK A;  1HQA A;  3UN5 A;  3DPC A;  3IGZ B;  1ANJ A;  1N2L A;  2IFY A;  1Y6V A;  1ZEB A;  1Y7A A;  3M8W A;  3UO0 A;  3BDG A;  2ANH A;  2GA3 A;  3NVL A;  1E1Z P;  3MK2 A;  1EW2 A;  1ALJ A;  1KH9 A;  3M8Z A;  3SZY A;  3T01 A;  4FDI A;  3M7V A; 
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similar chains in the KnotProt database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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