1ALJA

Alkaline phosphatase mutant (h412n)
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 43-365 323 1-42 417-446 366-416 42 30 slipknot
Chain Sequence
MPVLENRAAQGDITAPGGARRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQENTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALGLK
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
2.1 22-363 342 1-21 369-446 364-368 21 78 slipknot
view details
3.1 44-372 329 1-43 411-446 373-410 43 36 slipknot
view details
3.1 42-410 369 1-41 415-446 411-414 41 32 slipknot
view details
2.1 40-364 325 1-28, 370-446 29-39, 365-369 28 77 slipknot
view details
3.1 43-411 369 1-41, 415-446 42-42, 412-414 41 32 slipknot
sequence length 446
structure length 446
publication title Escherichia coli alkaline phosphatase: X-ray structural studies of a mutant enzyme (His-412-->Asn) at one of the catalytically important zinc binding sites.
pubmed rcsb
molecule tags Hydrolase (phosphoric monoester)
molecule keywords ALKALINE PHOSPHATASE
source organism Escherichia coli
total genus Genus: 164
ec nomenclature ec 3.1.3.1: Alkaline phosphatase.
pdb deposition date 1995-06-02
KnotProt deposition date 2014-07-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00245 Alk_phosphatase Alkaline phosphatase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 1aljA00
1E2SP 1URBA 1EQJA 1KH4A 3UN3A 3IGYB 1HDHA 4FDJA 1AJCA 1O98A 1ELXA 1KH7A 1N2KA 1AUKA 2G9YA 1E33P 2QZUA 1EJJA 3T02A 1ALIA 1ELZA 1SHNA 1ZEDA 3MK1A 1KHNA 1P49A 1E3CP 3ED4A 1AJAA 1ELYA 1B8JA 1FSUA 1KHKA 1ED8A 3M8YA 3BDGB 3TX0A 1KHLA 1KH5A 1KHJA 3DYCA 1AJDA 3MK0A 1ED9A 3T00A 1EI6A 3SZZA 3BDFA 1O99A 3CMRA 3UNYA 1URAA 1EW9A 3TWZA 3UN2A 2GLQA 1ANIA 1SHQA 1ALKA 3OT9A 1EW8A 1ZEFA 1AJBA 1K7HA 3BDHA 1HJKA 1HQAA 3UN5A 3DPCA 3IGZB 1ANJA 1N2LA 2IFYA 1Y6VA 1ZEBA 1Y7AA 3M8WA 3UO0A 3BDGA 2ANHA 2GA3A 3NVLA 1E1ZP 3MK2A 1EW2A 1ALJA 1KH9A 3M8ZA 3SZYA 3T01A 4FDIA 3M7VA
chains in the KnotProt database with same CATH superfamily
1E2SP 1URBA 1EQJA 1KH4A 3UN3A 3IGYB 1HDHA 4FDJA 1AJCA 1O98A 1ELXA 1KH7A 1N2KA 1AUKA 2G9YA 1E33P 2QZUA 1EJJA 3T02A 1ALIA 1ELZA 1SHNA 1ZEDA 3MK1A 1KHNA 1P49A 1E3CP 3ED4A 1AJAA 1ELYA 1B8JA 1FSUA 1KHKA 1ED8A 3M8YA 3BDGB 3TX0A 1KHLA 1KH5A 1KHJA 3DYCA 1AJDA 3MK0A 1ED9A 3T00A 1EI6A 3SZZA 3BDFA 1O99A 3CMRA 3UNYA 1URAA 1EW9A 3TWZA 3UN2A 2GLQA 1ANIA 1SHQA 1ALKA 3OT9A 1EW8A 1ZEFA 1AJBA 1K7HA 3BDHA 1HJKA 1HQAA 3UN5A 3DPCA 3IGZB 1ANJA 1N2LA 2IFYA 1Y6VA 1ZEBA 1Y7AA 3M8WA 3UO0A 3BDGA 2ANHA 2GA3A 3NVLA 1E1ZP 3MK2A 1EW2A 1ALJA 1KH9A 3M8ZA 3SZYA 3T01A 4FDIA 3M7VA
chains in the KnotProt database with same CATH topology
1E2SP 1URBA 1EQJA 1KH4A 3UN3A 3IGYB 1HDHA 4FDJA 1AJCA 1O98A 1ELXA 1KH7A 1N2KA 1AUKA 2G9YA 1E33P 2QZUA 1EJJA 3T02A 1ALIA 1ELZA 1SHNA 1ZEDA 3MK1A 1KHNA 1P49A 1E3CP 3ED4A 1AJAA 1ELYA 1B8JA 1FSUA 1KHKA 1ED8A 3M8YA 3BDGB 3TX0A 1KHLA 1KH5A 1KHJA 3DYCA 1AJDA 3MK0A 1ED9A 3T00A 1EI6A 3SZZA 3BDFA 1O99A 3CMRA 3UNYA 1URAA 1EW9A 3TWZA 3UN2A 2GLQA 1ANIA 1SHQA 1ALKA 3OT9A 1EW8A 1ZEFA 1AJBA 1K7HA 3BDHA 1HJKA 1HQAA 3UN5A 3DPCA 3IGZB 1ANJA 1N2LA 2IFYA 1Y6VA 1ZEBA 1Y7AA 3M8WA 3UO0A 3BDGA 2ANHA 2GA3A 3NVLA 1E1ZP 3MK2A 1EW2A 1ALJA 1KH9A 3M8ZA 3SZYA 3T01A 4FDIA 3M7VA
chains in the KnotProt database with same CATH homology


 
#chains in the KnotProt database with same CATH superfamily
 1E2S P;  1URB A;  1EQJ A;  1KH4 A;  3UN3 A;  3IGY B;  1HDH A;  4FDJ A;  1AJC A;  1O98 A;  1ELX A;  1KH7 A;  1N2K A;  1AUK A;  2G9Y A;  1E33 P;  2QZU A;  1EJJ A;  3T02 A;  1ALI A;  1ELZ A;  1SHN A;  1ZED A;  3MK1 A;  1KHN A;  1P49 A;  1E3C P;  3ED4 A;  1AJA A;  1ELY A;  1B8J A;  1FSU A;  1KHK A;  1ED8 A;  3M8Y A;  3BDG B;  3TX0 A;  1KHL A;  1KH5 A;  1KHJ A;  3DYC A;  1AJD A;  3MK0 A;  1ED9 A;  3T00 A;  1EI6 A;  3SZZ A;  3BDF A;  1O99 A;  3CMR A;  3UNY A;  1URA A;  1EW9 A;  3TWZ A;  3UN2 A;  2GLQ A;  1ANI A;  1SHQ A;  1ALK A;  3OT9 A;  1EW8 A;  1ZEF A;  1AJB A;  1K7H A;  3BDH A;  1HJK A;  1HQA A;  3UN5 A;  3DPC A;  3IGZ B;  1ANJ A;  1N2L A;  2IFY A;  1Y6V A;  1ZEB A;  1Y7A A;  3M8W A;  3UO0 A;  3BDG A;  2ANH A;  2GA3 A;  3NVL A;  1E1Z P;  3MK2 A;  1EW2 A;  1ALJ A;  1KH9 A;  3M8Z A;  3SZY A;  3T01 A;  4FDI A;  3M7V A; 
#chains in the KnotProt database with same CATH topology
 1E2S P;  1URB A;  1EQJ A;  1KH4 A;  3UN3 A;  3IGY B;  1HDH A;  4FDJ A;  1AJC A;  1O98 A;  1ELX A;  1KH7 A;  1N2K A;  1AUK A;  2G9Y A;  1E33 P;  2QZU A;  1EJJ A;  3T02 A;  1ALI A;  1ELZ A;  1SHN A;  1ZED A;  3MK1 A;  1KHN A;  1P49 A;  1E3C P;  3ED4 A;  1AJA A;  1ELY A;  1B8J A;  1FSU A;  1KHK A;  1ED8 A;  3M8Y A;  3BDG B;  3TX0 A;  1KHL A;  1KH5 A;  1KHJ A;  3DYC A;  1AJD A;  3MK0 A;  1ED9 A;  3T00 A;  1EI6 A;  3SZZ A;  3BDF A;  1O99 A;  3CMR A;  3UNY A;  1URA A;  1EW9 A;  3TWZ A;  3UN2 A;  2GLQ A;  1ANI A;  1SHQ A;  1ALK A;  3OT9 A;  1EW8 A;  1ZEF A;  1AJB A;  1K7H A;  3BDH A;  1HJK A;  1HQA A;  3UN5 A;  3DPC A;  3IGZ B;  1ANJ A;  1N2L A;  2IFY A;  1Y6V A;  1ZEB A;  1Y7A A;  3M8W A;  3UO0 A;  3BDG A;  2ANH A;  2GA3 A;  3NVL A;  1E1Z P;  3MK2 A;  1EW2 A;  1ALJ A;  1KH9 A;  3M8Z A;  3SZY A;  3T01 A;  4FDI A;  3M7V A; 
#chains in the KnotProt database with same CATH homology
 1E2S P;  1URB A;  1EQJ A;  1KH4 A;  3UN3 A;  3IGY B;  1HDH A;  4FDJ A;  1AJC A;  1O98 A;  1ELX A;  1KH7 A;  1N2K A;  1AUK A;  2G9Y A;  1E33 P;  2QZU A;  1EJJ A;  3T02 A;  1ALI A;  1ELZ A;  1SHN A;  1ZED A;  3MK1 A;  1KHN A;  1P49 A;  1E3C P;  3ED4 A;  1AJA A;  1ELY A;  1B8J A;  1FSU A;  1KHK A;  1ED8 A;  3M8Y A;  3BDG B;  3TX0 A;  1KHL A;  1KH5 A;  1KHJ A;  3DYC A;  1AJD A;  3MK0 A;  1ED9 A;  3T00 A;  1EI6 A;  3SZZ A;  3BDF A;  1O99 A;  3CMR A;  3UNY A;  1URA A;  1EW9 A;  3TWZ A;  3UN2 A;  2GLQ A;  1ANI A;  1SHQ A;  1ALK A;  3OT9 A;  1EW8 A;  1ZEF A;  1AJB A;  1K7H A;  3BDH A;  1HJK A;  1HQA A;  3UN5 A;  3DPC A;  3IGZ B;  1ANJ A;  1N2L A;  2IFY A;  1Y6V A;  1ZEB A;  1Y7A A;  3M8W A;  3UO0 A;  3BDG A;  2ANH A;  2GA3 A;  3NVL A;  1E1Z P;  3MK2 A;  1EW2 A;  1ALJ A;  1KH9 A;  3M8Z A;  3SZY A;  3T01 A;  4FDI A;  3M7V A; 
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similar chains in the KnotProt database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the KnotProt database (?% sequence similarity)
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#similar chains, but unknotted
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