1KHLA

E. coli alkaline phosphatase mutant (d153hd330n) complex with phosphate
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 42-364 323 1-41 414-444 365-413 41 31 slipknot
Chain Sequence
VLENRAAQGNITAPGGARRLTGDQTAALRNSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQHATPAALVAHVTSRKCYGPSATSQKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAGEWQGKTLREEAEARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQNHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALGLK
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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2.1 28-361 334 1-27 367-444 362-366 27 78 slipknot
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3.1 42-367 326 1-41 409-444 368-408 41 36 slipknot
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2.1 25-409 385 1-24 416-444 410-415 24 29 slipknot
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2.1 37-408 372 1-19, 416-444 20-36, 409-415 19 29 slipknot
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2.1 38-408 371 1-36, 416-444 37-37, 409-415 36 29 slipknot
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2.1 39-408 370 1-37, 414-444 38-38, 409-413 37 31 slipknot
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2.1 40-409 370 1-38, 416-444 39-39, 410-415 38 29 slipknot
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2.1 39-362 324 1-31, 368-444 32-38, 363-367 31 77 slipknot
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2.1 43-377 335 1-41, 384-444 42-42, 378-383 41 61 slipknot
sequence length 444
structure length 444
publication title Artificial evolution of an enzyme active site: structural studies of three highly active mutants of Escherichia coli alkaline phosphatase.
pubmed doi rcsb
molecule tags Hydrolase
molecule keywords Alkaline Phosphatase
source organism Escherichia coli
total genus Genus: 150
ec nomenclature ec 3.1.3.1: Alkaline phosphatase.
pdb deposition date 2001-11-30
KnotProt deposition date 2014-07-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00245 Alk_phosphatase Alkaline phosphatase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 1khlA00
1ZEBA 1AJAA 1ALJA 2GLQA 3TWZA 1KH4A 1KH7A 1ANJA 2GA3A 1KHKA 3NVLA 3UN5A 3M7VA 1N2KA 1ELYA 1AUKA 1E1ZP 1O99A 3OT9A 1KH5A 3M8ZA 1HDHA 1URBA 3SZZA 1K7HA 1ELZA 2QZUA 1EI6A 1HJKA 1KHLA 1FSUA 3T01A 1E2SP 1ZEDA 1AJCA 1SHQA 3CMRA 1EQJA 1EW2A 3UN3A 3IGZB 1B8JA 2IFYA 3SZYA 1ED8A 1ANIA 2ANHA 1ZEFA 3UO0A 1KH9A 3TX0A 3MK2A 4FDIA 3M8YA 1ALIA 4FDJA 1E3CP 1EW9A 3UNYA 2G9YA 1ALKA 3ED4A 3DPCA 1ELXA 1EW8A 1O98A 1AJDA 1AJBA 3T02A 3T00A 1N2LA 3MK0A 1EJJA 1Y6VA 3BDFA 1URAA 1KHNA 1Y7AA 3M8WA 3MK1A 3UN2A 1E33P 1P49A 3DYCA 1HQAA 1ED9A 1SHNA 3BDGA 3BDHA 3IGYB 1KHJA 3BDGB
chains in the KnotProt database with same CATH superfamily
1ZEBA 1AJAA 1ALJA 2GLQA 3TWZA 1KH4A 1KH7A 1ANJA 2GA3A 1KHKA 3NVLA 3UN5A 3M7VA 1N2KA 1ELYA 1AUKA 1E1ZP 1O99A 3OT9A 1KH5A 3M8ZA 1HDHA 1URBA 3SZZA 1K7HA 1ELZA 2QZUA 1EI6A 1HJKA 1KHLA 1FSUA 3T01A 1E2SP 1ZEDA 1AJCA 1SHQA 3CMRA 1EQJA 1EW2A 3UN3A 3IGZB 1B8JA 2IFYA 3SZYA 1ED8A 1ANIA 2ANHA 1ZEFA 3UO0A 1KH9A 3TX0A 3MK2A 4FDIA 3M8YA 1ALIA 4FDJA 1E3CP 1EW9A 3UNYA 2G9YA 1ALKA 3ED4A 3DPCA 1ELXA 1EW8A 1O98A 1AJDA 1AJBA 3T02A 3T00A 1N2LA 3MK0A 1EJJA 1Y6VA 3BDFA 1URAA 1KHNA 1Y7AA 3M8WA 3MK1A 3UN2A 1E33P 1P49A 3DYCA 1HQAA 1ED9A 1SHNA 3BDGA 3BDHA 3IGYB 1KHJA 3BDGB
chains in the KnotProt database with same CATH topology
1ZEBA 1AJAA 1ALJA 2GLQA 3TWZA 1KH4A 1KH7A 1ANJA 2GA3A 1KHKA 3NVLA 3UN5A 3M7VA 1N2KA 1ELYA 1AUKA 1E1ZP 1O99A 3OT9A 1KH5A 3M8ZA 1HDHA 1URBA 3SZZA 1K7HA 1ELZA 2QZUA 1EI6A 1HJKA 1KHLA 1FSUA 3T01A 1E2SP 1ZEDA 1AJCA 1SHQA 3CMRA 1EQJA 1EW2A 3UN3A 3IGZB 1B8JA 2IFYA 3SZYA 1ED8A 1ANIA 2ANHA 1ZEFA 3UO0A 1KH9A 3TX0A 3MK2A 4FDIA 3M8YA 1ALIA 4FDJA 1E3CP 1EW9A 3UNYA 2G9YA 1ALKA 3ED4A 3DPCA 1ELXA 1EW8A 1O98A 1AJDA 1AJBA 3T02A 3T00A 1N2LA 3MK0A 1EJJA 1Y6VA 3BDFA 1URAA 1KHNA 1Y7AA 3M8WA 3MK1A 3UN2A 1E33P 1P49A 3DYCA 1HQAA 1ED9A 1SHNA 3BDGA 3BDHA 3IGYB 1KHJA 3BDGB
chains in the KnotProt database with same CATH homology


 
#chains in the KnotProt database with same CATH superfamily
 1ZEB A;  1AJA A;  1ALJ A;  2GLQ A;  3TWZ A;  1KH4 A;  1KH7 A;  1ANJ A;  2GA3 A;  1KHK A;  3NVL A;  3UN5 A;  3M7V A;  1N2K A;  1ELY A;  1AUK A;  1E1Z P;  1O99 A;  3OT9 A;  1KH5 A;  3M8Z A;  1HDH A;  1URB A;  3SZZ A;  1K7H A;  1ELZ A;  2QZU A;  1EI6 A;  1HJK A;  1KHL A;  1FSU A;  3T01 A;  1E2S P;  1ZED A;  1AJC A;  1SHQ A;  3CMR A;  1EQJ A;  1EW2 A;  3UN3 A;  3IGZ B;  1B8J A;  2IFY A;  3SZY A;  1ED8 A;  1ANI A;  2ANH A;  1ZEF A;  3UO0 A;  1KH9 A;  3TX0 A;  3MK2 A;  4FDI A;  3M8Y A;  1ALI A;  4FDJ A;  1E3C P;  1EW9 A;  3UNY A;  2G9Y A;  1ALK A;  3ED4 A;  3DPC A;  1ELX A;  1EW8 A;  1O98 A;  1AJD A;  1AJB A;  3T02 A;  3T00 A;  1N2L A;  3MK0 A;  1EJJ A;  1Y6V A;  3BDF A;  1URA A;  1KHN A;  1Y7A A;  3M8W A;  3MK1 A;  3UN2 A;  1E33 P;  1P49 A;  3DYC A;  1HQA A;  1ED9 A;  1SHN A;  3BDG A;  3BDH A;  3IGY B;  1KHJ A;  3BDG B; 
#chains in the KnotProt database with same CATH topology
 1ZEB A;  1AJA A;  1ALJ A;  2GLQ A;  3TWZ A;  1KH4 A;  1KH7 A;  1ANJ A;  2GA3 A;  1KHK A;  3NVL A;  3UN5 A;  3M7V A;  1N2K A;  1ELY A;  1AUK A;  1E1Z P;  1O99 A;  3OT9 A;  1KH5 A;  3M8Z A;  1HDH A;  1URB A;  3SZZ A;  1K7H A;  1ELZ A;  2QZU A;  1EI6 A;  1HJK A;  1KHL A;  1FSU A;  3T01 A;  1E2S P;  1ZED A;  1AJC A;  1SHQ A;  3CMR A;  1EQJ A;  1EW2 A;  3UN3 A;  3IGZ B;  1B8J A;  2IFY A;  3SZY A;  1ED8 A;  1ANI A;  2ANH A;  1ZEF A;  3UO0 A;  1KH9 A;  3TX0 A;  3MK2 A;  4FDI A;  3M8Y A;  1ALI A;  4FDJ A;  1E3C P;  1EW9 A;  3UNY A;  2G9Y A;  1ALK A;  3ED4 A;  3DPC A;  1ELX A;  1EW8 A;  1O98 A;  1AJD A;  1AJB A;  3T02 A;  3T00 A;  1N2L A;  3MK0 A;  1EJJ A;  1Y6V A;  3BDF A;  1URA A;  1KHN A;  1Y7A A;  3M8W A;  3MK1 A;  3UN2 A;  1E33 P;  1P49 A;  3DYC A;  1HQA A;  1ED9 A;  1SHN A;  3BDG A;  3BDH A;  3IGY B;  1KHJ A;  3BDG B; 
#chains in the KnotProt database with same CATH homology
 1ZEB A;  1AJA A;  1ALJ A;  2GLQ A;  3TWZ A;  1KH4 A;  1KH7 A;  1ANJ A;  2GA3 A;  1KHK A;  3NVL A;  3UN5 A;  3M7V A;  1N2K A;  1ELY A;  1AUK A;  1E1Z P;  1O99 A;  3OT9 A;  1KH5 A;  3M8Z A;  1HDH A;  1URB A;  3SZZ A;  1K7H A;  1ELZ A;  2QZU A;  1EI6 A;  1HJK A;  1KHL A;  1FSU A;  3T01 A;  1E2S P;  1ZED A;  1AJC A;  1SHQ A;  3CMR A;  1EQJ A;  1EW2 A;  3UN3 A;  3IGZ B;  1B8J A;  2IFY A;  3SZY A;  1ED8 A;  1ANI A;  2ANH A;  1ZEF A;  3UO0 A;  1KH9 A;  3TX0 A;  3MK2 A;  4FDI A;  3M8Y A;  1ALI A;  4FDJ A;  1E3C P;  1EW9 A;  3UNY A;  2G9Y A;  1ALK A;  3ED4 A;  3DPC A;  1ELX A;  1EW8 A;  1O98 A;  1AJD A;  1AJB A;  3T02 A;  3T00 A;  1N2L A;  3MK0 A;  1EJJ A;  1Y6V A;  3BDF A;  1URA A;  1KHN A;  1Y7A A;  3M8W A;  3MK1 A;  3UN2 A;  1E33 P;  1P49 A;  3DYC A;  1HQA A;  1ED9 A;  1SHN A;  3BDG A;  3BDH A;  3IGY B;  1KHJ A;  3BDG B; 
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similar chains in the KnotProt database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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