1EI6 | KnotProt

Genus: 126

Slipknot S +3₁

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY

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Help Knotting data interpretation Full screen

					Knot core range	Knot core length	Knot tails range	Slipknot tails range	Slipknot loops range	N-end length	C-end length	Type
view details				+3₁	24-240	217	1-23	376-406	241-375	23	31	slipknot

Chain Sequence

TNLISVNSRSYRLSSAPTIVICVDGCEQEYINQAIQAGQAPFLAELTGFGTVLTGDCVVPSFTNPNNLSIVTGAPPSVHGICGNFFFDQETQEEVLMNDAKYLRAPTILAEMAKAGQLVAVVTAKDKLRNLLGHQLKGICFSAEKADQVNLEEHGVENILARVGMPVPSVYSADLSEFVFAAGLSLLTNERPDFMYLSTTDYVQHKHAPGTPEANAFYAMMDSYFKRYHEQGAIVAITADHGMNAKTDAIGRPNILFLQDLLDAQYGAQRTRVLLPITDPYVVHHGALGSYATVYLRDAVPQRDAIDFLAGIAGVEAVLTRSQACQRFELPEDRIGDLVVLGERLTVLGSAADKHDLSGLTVPLRSHGGVSEQKVPLIFNRKLVGLD--GRLRNFDIIDLALNHLA

Whole chain analysis

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Subchain analysis

Knotoid cutoff: 0.5

Knotoid matrix content: 1

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Jmol Version: 14.29.13 2018-04-17 17:17

java.vendor: Java2Script (HTML5)

java.version: 2018-01-28 23:38:52 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

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Jmol getValue ECHOCallback null

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Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue SERVICECallback null

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language=en_US

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Help Knotoid subchains data interpretation Full screen

		Knot core range	Knot core length	Knot tails range	Slipknot tails range	Slipknot loops range	N-end length	C-end length	Type
view details	3.1	22-240	219	1-21	368-404	241-367	21	37	slipknot
view details	3.1	22-367	346	1-21	372-404	368-371	21	33	slipknot
view details	3.1	21-371	351	1-20	374-404	372-373	20	31	slipknot

sequence length	406
structure length	404
publication title	Crystal structure of Phosphonoacetate Hydrolase complexed with phosphonoformate rcsb
molecule tags	Hydrolase
molecule keywords	PHOSPHONOACETATE HYDROLASE
source organism	Pseudomonas fluorescens
missing residues	388-389
total genus	Genus: 126
ec nomenclature	ec 3.11.1.2: Phosphonoacetate hydrolase.
pdb deposition date	2000-02-24
KnotProt deposition date	2014-07-31

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF01663	Phosphodiest	Type I phosphodiesterase / nucleotide pyrophosphatase

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.1360.110	Alpha Beta	2-Layer Sandwich	Gyrase A; domain 2	Domain 2, Phosphonoacetate Hydrolase	1ei6A02
3.40.720.10	Alpha Beta	3-Layer(aba) Sandwich	Alkaline Phosphatase, subunit A	Alkaline Phosphatase, subunit A	1ei6A01

1KH5A 3BDHA 3BDFA 2QZUA 1Y7AA 1E3CP 1EW2A 1K7HA 1HJKA 1KH7A 1ED9A 3M8WA 1ALKA 3BDGB 1O98A 1ALIA 3UN3A 1HQAA 1E1ZP 3UN2A 1HDHA 2ANHA 3SZYA 1KHKA 3UN5A 4FDIA 1AJDA 1EW9A 1ED8A 1AJBA 3T01A 1Y6VA 1ELYA 1SHNA 3IGZB 1EJJA 3SZZA 1KHLA 1KHJA 1ALJA 1ELZA 1AJAA 3MK0A 1E33P 1URAA 1URBA 1EW8A 3NVLA 3OT9A 2G9YA 3MK2A 3CMRA 3TX0A 3ED4A 3M8ZA 2GA3A 3M8YA 1E2SP 1ELXA 1P49A 1FSUA 1EQJA 2IFYA 1KH4A 1ANJA 1ZEFA 1ZEBA 3T00A 2GLQA 3MK1A 1N2LA 3BDGA 1ZEDA 1EI6A 3DYCA 3UO0A 1O99A 3M7VA 3UNYA 3IGYB 1B8JA 4FDJA 1SHQA 1ANIA 3TWZA 1KHNA 1AUKA 1N2KA 1AJCA 3T02A 3DPCA 1KH9A
chains in the KnotProt database with same CATH superfamily

#chains in the KnotProt database with same CATH superfamily
 1KH5 A;  3BDH A;  3BDF A;  2QZU A;  1Y7A A;  1E3C P;  1EW2 A;  1K7H A;  1HJK A;  1KH7 A;  1ED9 A;  3M8W A;  1ALK A;  3BDG B;  1O98 A;  1ALI A;  3UN3 A;  1HQA A;  1E1Z P;  3UN2 A;  1HDH A;  2ANH A;  3SZY A;  1KHK A;  3UN5 A;  4FDI A;  1AJD A;  1EW9 A;  1ED8 A;  1AJB A;  3T01 A;  1Y6V A;  1ELY A;  1SHN A;  3IGZ B;  1EJJ A;  3SZZ A;  1KHL A;  1KHJ A;  1ALJ A;  1ELZ A;  1AJA A;  3MK0 A;  1E33 P;  1URA A;  1URB A;  1EW8 A;  3NVL A;  3OT9 A;  2G9Y A;  3MK2 A;  3CMR A;  3TX0 A;  3ED4 A;  3M8Z A;  2GA3 A;  3M8Y A;  1E2S P;  1ELX A;  1P49 A;  1FSU A;  1EQJ A;  2IFY A;  1KH4 A;  1ANJ A;  1ZEF A;  1ZEB A;  3T00 A;  2GLQ A;  3MK1 A;  1N2L A;  3BDG A;  1ZED A;  1EI6 A;  3DYC A;  3UO0 A;  1O99 A;  3M7V A;  3UNY A;  3IGY B;  1B8J A;  4FDJ A;  1SHQ A;  1ANI A;  3TWZ A;  1KHN A;  1AUK A;  1N2K A;  1AJC A;  3T02 A;  3DPC A;  1KH9 A; 
#chains in the KnotProt database with same CATH topology
 1KH5 A;  3BDH A;  3BDF A;  2QZU A;  1Y7A A;  1E3C P;  1EW2 A;  1K7H A;  1HJK A;  1KH7 A;  1ED9 A;  3M8W A;  1ALK A;  3BDG B;  1O98 A;  1ALI A;  3UN3 A;  1HQA A;  1E1Z P;  3UN2 A;  1HDH A;  2ANH A;  3SZY A;  1KHK A;  3UN5 A;  4FDI A;  1AJD A;  1EW9 A;  1ED8 A;  1AJB A;  3T01 A;  1Y6V A;  1ELY A;  1SHN A;  3IGZ B;  1EJJ A;  3SZZ A;  1KHL A;  1KHJ A;  1ALJ A;  1ELZ A;  1AJA A;  3MK0 A;  1E33 P;  1URA A;  1URB A;  1EW8 A;  3NVL A;  3OT9 A;  2G9Y A;  3MK2 A;  3CMR A;  3TX0 A;  3ED4 A;  3M8Z A;  2GA3 A;  3M8Y A;  1E2S P;  1ELX A;  1P49 A;  1FSU A;  1EQJ A;  2IFY A;  1KH4 A;  1ANJ A;  1ZEF A;  1ZEB A;  3T00 A;  2GLQ A;  3MK1 A;  1N2L A;  3BDG A;  1ZED A;  1EI6 A;  3DYC A;  3UO0 A;  1O99 A;  3M7V A;  3UNY A;  3IGY B;  1B8J A;  4FDJ A;  1SHQ A;  1ANI A;  3TWZ A;  1KHN A;  1AUK A;  1N2K A;  1AJC A;  3T02 A;  3DPC A;  1KH9 A; 
#chains in the KnotProt database with same CATH homology
 1KH5 A;  3BDH A;  3BDF A;  2QZU A;  1Y7A A;  1E3C P;  1EW2 A;  1K7H A;  1HJK A;  1KH7 A;  1ED9 A;  3M8W A;  1ALK A;  3BDG B;  1O98 A;  1ALI A;  3UN3 A;  1HQA A;  1E1Z P;  3UN2 A;  1HDH A;  2ANH A;  3SZY A;  1KHK A;  3UN5 A;  4FDI A;  1AJD A;  1EW9 A;  1ED8 A;  1AJB A;  3T01 A;  1Y6V A;  1ELY A;  1SHN A;  3IGZ B;  1EJJ A;  3SZZ A;  1KHL A;  1KHJ A;  1ALJ A;  1ELZ A;  1AJA A;  3MK0 A;  1E33 P;  1URA A;  1URB A;  1EW8 A;  3NVL A;  3OT9 A;  2G9Y A;  3MK2 A;  3CMR A;  3TX0 A;  3ED4 A;  3M8Z A;  2GA3 A;  3M8Y A;  1E2S P;  1ELX A;  1P49 A;  1FSU A;  1EQJ A;  2IFY A;  1KH4 A;  1ANJ A;  1ZEF A;  1ZEB A;  3T00 A;  2GLQ A;  3MK1 A;  1N2L A;  3BDG A;  1ZED A;  1EI6 A;  3DYC A;  3UO0 A;  1O99 A;  3M7V A;  3UNY A;  3IGY B;  1B8J A;  4FDJ A;  1SHQ A;  1ANI A;  3TWZ A;  1KHN A;  1AUK A;  1N2K A;  1AJC A;  3T02 A;  3DPC A;  1KH9 A;

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similar chains in the KnotProt database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

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1EI6A

Slipknot S +31

Chain Sequence

pfam database annotations

Slipknot S +3₁