1ELZA

E. coli alkaline phosphatase mutant (s102g)
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 47-368 322 1-46 419-449 369-418 46 31 slipknot
Chain Sequence
TPEMPVLENRAAQGDITAPGGARRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDYVTDGAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALGLK
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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3.1 47-378 332 1-46 417-449 379-416 46 33 slipknot
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2.1 38-416 379 1-37 421-449 417-420 37 29 slipknot
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2.1 30-367 338 1-6, 373-449 7-29, 368-372 6 77 slipknot
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2.1 20-372 353 1-7, 376-449 8-19, 373-375 7 74 slipknot
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2.1 21-372 352 1-19, 376-449 20-20, 373-375 19 74 slipknot
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2.1 44-416 373 1-37, 421-449 38-43, 417-420 37 29 slipknot
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2.1 46-416 371 1-43, 421-449 44-45, 417-420 43 29 slipknot
sequence length 449
structure length 449
publication title Kinetic and X-ray structural studies of three mutant E. coli alkaline phosphatases: insights into the catalytic mechanism without the nucleophile Ser102.
pubmed doi rcsb
molecule tags Hydrolase
molecule keywords ALKALINE PHOSPHATASE
source organism Escherichia coli
total genus Genus: 157
ec nomenclature ec 3.1.3.1: Alkaline phosphatase.
pdb deposition date 1998-02-10
KnotProt deposition date 2014-07-31
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 1elzA00
3MK2A 1ZEDA 3M7VA 1N2LA 4FDJA 1ANJA 3IGYB 1ALKA 1N2KA 3ED4A 3MK0A 3M8WA 1O98A 1EW8A 1AUKA 1KH4A 1KHNA 3DYCA 1E1ZP 1ELYA 1ALHA 2IFYA 3UNYA 1KH9A 1EJJA 1EQJA 2GLQA 3T02A 1KH5A 3BDHA 1KH7A 1FSUA 1AJBA 3DPCA 1ALIA 1Y6VA 1ELZA 1ZEBA 3BDGA 3BDGB 1O99A 1SHNA 2ANHA 1ZEFA 3BDFA 3UN2A 1KHJA 1P49A 1EW2A 3MK1A 1E3CP 1AJAA 3CMRA 1EI6A 1URAA 1AJDA 1KHLA 1URBA 1K7HA 1SHQA 3M8ZA 3UN3A 3NVLA 3T00A 2QZUA 1E2SP 1KHKA 3TX0A 3IGZB 2GA3A 1E33P 2G9YA 1HJKA 3T01A 3SZZA 1ED8A 3TWZA 1B8JA 1ELXA 1ED9A 1AJCA 1ANIA 3UN5A 1HQAA 3SZYA 1Y7AA 1HDHA 3UO0A 3M8YA 1EW9A 3OT9A 4FDIA 1ALJA
chains in the KnotProt database with same CATH superfamily
3MK2A 1ZEDA 3M7VA 1N2LA 4FDJA 1ANJA 3IGYB 1ALKA 1N2KA 3ED4A 3MK0A 3M8WA 1O98A 1EW8A 1AUKA 1KH4A 1KHNA 3DYCA 1E1ZP 1ELYA 1ALHA 2IFYA 3UNYA 1KH9A 1EJJA 1EQJA 2GLQA 3T02A 1KH5A 3BDHA 1KH7A 1FSUA 1AJBA 3DPCA 1ALIA 1Y6VA 1ELZA 1ZEBA 3BDGA 3BDGB 1O99A 1SHNA 2ANHA 1ZEFA 3BDFA 3UN2A 1KHJA 1P49A 1EW2A 3MK1A 1E3CP 1AJAA 3CMRA 1EI6A 1URAA 1AJDA 1KHLA 1URBA 1K7HA 1SHQA 3M8ZA 3UN3A 3NVLA 3T00A 2QZUA 1E2SP 1KHKA 3TX0A 3IGZB 2GA3A 1E33P 2G9YA 1HJKA 3T01A 3SZZA 1ED8A 3TWZA 1B8JA 1ELXA 1ED9A 1AJCA 1ANIA 3UN5A 1HQAA 3SZYA 1Y7AA 1HDHA 3UO0A 3M8YA 1EW9A 3OT9A 4FDIA 1ALJA
chains in the KnotProt database with same CATH topology
3MK2A 1ZEDA 3M7VA 1N2LA 4FDJA 1ANJA 3IGYB 1ALKA 1N2KA 3ED4A 3MK0A 3M8WA 1O98A 1EW8A 1AUKA 1KH4A 1KHNA 3DYCA 1E1ZP 1ELYA 1ALHA 2IFYA 3UNYA 1KH9A 1EJJA 1EQJA 2GLQA 3T02A 1KH5A 3BDHA 1KH7A 1FSUA 1AJBA 3DPCA 1ALIA 1Y6VA 1ELZA 1ZEBA 3BDGA 3BDGB 1O99A 1SHNA 2ANHA 1ZEFA 3BDFA 3UN2A 1KHJA 1P49A 1EW2A 3MK1A 1E3CP 1AJAA 3CMRA 1EI6A 1URAA 1AJDA 1KHLA 1URBA 1K7HA 1SHQA 3M8ZA 3UN3A 3NVLA 3T00A 2QZUA 1E2SP 1KHKA 3TX0A 3IGZB 2GA3A 1E33P 2G9YA 1HJKA 3T01A 3SZZA 1ED8A 3TWZA 1B8JA 1ELXA 1ED9A 1AJCA 1ANIA 3UN5A 1HQAA 3SZYA 1Y7AA 1HDHA 3UO0A 3M8YA 1EW9A 3OT9A 4FDIA 1ALJA
chains in the KnotProt database with same CATH homology


 
#chains in the KnotProt database with same CATH superfamily
 3MK2 A;  1ZED A;  3M7V A;  1N2L A;  4FDJ A;  1ANJ A;  3IGY B;  1ALK A;  1N2K A;  3ED4 A;  3MK0 A;  3M8W A;  1O98 A;  1EW8 A;  1AUK A;  1KH4 A;  1KHN A;  3DYC A;  1E1Z P;  1ELY A;  1ALH A;  2IFY A;  3UNY A;  1KH9 A;  1EJJ A;  1EQJ A;  2GLQ A;  3T02 A;  1KH5 A;  3BDH A;  1KH7 A;  1FSU A;  1AJB A;  3DPC A;  1ALI A;  1Y6V A;  1ELZ A;  1ZEB A;  3BDG A;  3BDG B;  1O99 A;  1SHN A;  2ANH A;  1ZEF A;  3BDF A;  3UN2 A;  1KHJ A;  1P49 A;  1EW2 A;  3MK1 A;  1E3C P;  1AJA A;  3CMR A;  1EI6 A;  1URA A;  1AJD A;  1KHL A;  1URB A;  1K7H A;  1SHQ A;  3M8Z A;  3UN3 A;  3NVL A;  3T00 A;  2QZU A;  1E2S P;  1KHK A;  3TX0 A;  3IGZ B;  2GA3 A;  1E33 P;  2G9Y A;  1HJK A;  3T01 A;  3SZZ A;  1ED8 A;  3TWZ A;  1B8J A;  1ELX A;  1ED9 A;  1AJC A;  1ANI A;  3UN5 A;  1HQA A;  3SZY A;  1Y7A A;  1HDH A;  3UO0 A;  3M8Y A;  1EW9 A;  3OT9 A;  4FDI A;  1ALJ A; 
#chains in the KnotProt database with same CATH topology
 3MK2 A;  1ZED A;  3M7V A;  1N2L A;  4FDJ A;  1ANJ A;  3IGY B;  1ALK A;  1N2K A;  3ED4 A;  3MK0 A;  3M8W A;  1O98 A;  1EW8 A;  1AUK A;  1KH4 A;  1KHN A;  3DYC A;  1E1Z P;  1ELY A;  1ALH A;  2IFY A;  3UNY A;  1KH9 A;  1EJJ A;  1EQJ A;  2GLQ A;  3T02 A;  1KH5 A;  3BDH A;  1KH7 A;  1FSU A;  1AJB A;  3DPC A;  1ALI A;  1Y6V A;  1ELZ A;  1ZEB A;  3BDG A;  3BDG B;  1O99 A;  1SHN A;  2ANH A;  1ZEF A;  3BDF A;  3UN2 A;  1KHJ A;  1P49 A;  1EW2 A;  3MK1 A;  1E3C P;  1AJA A;  3CMR A;  1EI6 A;  1URA A;  1AJD A;  1KHL A;  1URB A;  1K7H A;  1SHQ A;  3M8Z A;  3UN3 A;  3NVL A;  3T00 A;  2QZU A;  1E2S P;  1KHK A;  3TX0 A;  3IGZ B;  2GA3 A;  1E33 P;  2G9Y A;  1HJK A;  3T01 A;  3SZZ A;  1ED8 A;  3TWZ A;  1B8J A;  1ELX A;  1ED9 A;  1AJC A;  1ANI A;  3UN5 A;  1HQA A;  3SZY A;  1Y7A A;  1HDH A;  3UO0 A;  3M8Y A;  1EW9 A;  3OT9 A;  4FDI A;  1ALJ A; 
#chains in the KnotProt database with same CATH homology
 3MK2 A;  1ZED A;  3M7V A;  1N2L A;  4FDJ A;  1ANJ A;  3IGY B;  1ALK A;  1N2K A;  3ED4 A;  3MK0 A;  3M8W A;  1O98 A;  1EW8 A;  1AUK A;  1KH4 A;  1KHN A;  3DYC A;  1E1Z P;  1ELY A;  1ALH A;  2IFY A;  3UNY A;  1KH9 A;  1EJJ A;  1EQJ A;  2GLQ A;  3T02 A;  1KH5 A;  3BDH A;  1KH7 A;  1FSU A;  1AJB A;  3DPC A;  1ALI A;  1Y6V A;  1ELZ A;  1ZEB A;  3BDG A;  3BDG B;  1O99 A;  1SHN A;  2ANH A;  1ZEF A;  3BDF A;  3UN2 A;  1KHJ A;  1P49 A;  1EW2 A;  3MK1 A;  1E3C P;  1AJA A;  3CMR A;  1EI6 A;  1URA A;  1AJD A;  1KHL A;  1URB A;  1K7H A;  1SHQ A;  3M8Z A;  3UN3 A;  3NVL A;  3T00 A;  2QZU A;  1E2S P;  1KHK A;  3TX0 A;  3IGZ B;  2GA3 A;  1E33 P;  2G9Y A;  1HJK A;  3T01 A;  3SZZ A;  1ED8 A;  3TWZ A;  1B8J A;  1ELX A;  1ED9 A;  1AJC A;  1ANI A;  3UN5 A;  1HQA A;  3SZY A;  1Y7A A;  1HDH A;  3UO0 A;  3M8Y A;  1EW9 A;  3OT9 A;  4FDI A;  1ALJ A; 
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similar chains in the KnotProt database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the KnotProt database (?% sequence similarity)
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#similar chains, but unknotted
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