1ALIA

Alkaline phosphatase mutant (h412n)
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 43-366 324 1-42 416-446 367-415 42 31 slipknot
Chain Sequence
MPVLENRAAQGDITAPGGARRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQENTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALGLK
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1 44-370 327 1-43 414-446 371-413 43 33 slipknot
view details
3.1 42-413 372 1-41 418-446 414-417 41 29 slipknot
view details
2.1 13-364 352 1-2, 369-446 3-12, 365-368 2 78 slipknot
view details
2.1 37-363 327 1-6, 370-446 7-36, 364-369 6 77 slipknot
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2.1 37-369 333 1-6, 371-446 7-36, 370-370 6 76 slipknot
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2.1 42-365 324 1-38, 370-446 39-41, 366-369 38 77 slipknot
sequence length 446
structure length 446
publication title Escherichia coli alkaline phosphatase: X-ray structural studies of a mutant enzyme (His-412-->Asn) at one of the catalytically important zinc binding sites.
pubmed rcsb
molecule tags Hydrolase (phosphoric monoester)
molecule keywords ALKALINE PHOSPHATASE
source organism Escherichia coli
total genus Genus: 162
ec nomenclature ec 3.1.3.1: Alkaline phosphatase.
pdb deposition date 1995-06-02
KnotProt deposition date 2014-07-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00245 Alk_phosphatase Alkaline phosphatase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 1aliA00
2GLQA 1EJJA 3NVLA 3IGYB 3SZZA 3M8YA 2ANHA 1SHQA 1O98A 1ELYA 1E2SP 3OT9A 3BDGB 3DPCA 1KH4A 3ED4A 1E3CP 1EI6A 1EW2A 1AJBA 1KHNA 3SZYA 1ALIA 3TWZA 1HJKA 1KH5A 3UN3A 1ZEBA 1HQAA 3UN2A 3M8WA 1ALJA 2GA3A 4FDIA 1AUKA 3MK1A 1ED9A 3UNYA 1E1ZP 4FDJA 1EW9A 1Y7AA 1N2LA 1E33P 1KHJA 3BDFA 3MK0A 1ANJA 3M7VA 1K7HA 2QZUA 1HDHA 1AJDA 3M8ZA 1N2KA 1ANIA 2G9YA 3CMRA 3UN5A 1KHLA 1ELXA 3DYCA 3UO0A 1ELZA 1Y6VA 3BDGA 2IFYA 3IGZB 1ZEDA 3T01A 1KH7A 1EW8A 1URBA 1EQJA 1AJAA 1ALKA 1KHKA 1B8JA 3T00A 1ED8A 1ZEFA 1P49A 1FSUA 1AJCA 3BDHA 1O99A 1SHNA 3T02A 1URAA 3TX0A 3MK2A 1KH9A
chains in the KnotProt database with same CATH superfamily
2GLQA 1EJJA 3NVLA 3IGYB 3SZZA 3M8YA 2ANHA 1SHQA 1O98A 1ELYA 1E2SP 3OT9A 3BDGB 3DPCA 1KH4A 3ED4A 1E3CP 1EI6A 1EW2A 1AJBA 1KHNA 3SZYA 1ALIA 3TWZA 1HJKA 1KH5A 3UN3A 1ZEBA 1HQAA 3UN2A 3M8WA 1ALJA 2GA3A 4FDIA 1AUKA 3MK1A 1ED9A 3UNYA 1E1ZP 4FDJA 1EW9A 1Y7AA 1N2LA 1E33P 1KHJA 3BDFA 3MK0A 1ANJA 3M7VA 1K7HA 2QZUA 1HDHA 1AJDA 3M8ZA 1N2KA 1ANIA 2G9YA 3CMRA 3UN5A 1KHLA 1ELXA 3DYCA 3UO0A 1ELZA 1Y6VA 3BDGA 2IFYA 3IGZB 1ZEDA 3T01A 1KH7A 1EW8A 1URBA 1EQJA 1AJAA 1ALKA 1KHKA 1B8JA 3T00A 1ED8A 1ZEFA 1P49A 1FSUA 1AJCA 3BDHA 1O99A 1SHNA 3T02A 1URAA 3TX0A 3MK2A 1KH9A
chains in the KnotProt database with same CATH topology
2GLQA 1EJJA 3NVLA 3IGYB 3SZZA 3M8YA 2ANHA 1SHQA 1O98A 1ELYA 1E2SP 3OT9A 3BDGB 3DPCA 1KH4A 3ED4A 1E3CP 1EI6A 1EW2A 1AJBA 1KHNA 3SZYA 1ALIA 3TWZA 1HJKA 1KH5A 3UN3A 1ZEBA 1HQAA 3UN2A 3M8WA 1ALJA 2GA3A 4FDIA 1AUKA 3MK1A 1ED9A 3UNYA 1E1ZP 4FDJA 1EW9A 1Y7AA 1N2LA 1E33P 1KHJA 3BDFA 3MK0A 1ANJA 3M7VA 1K7HA 2QZUA 1HDHA 1AJDA 3M8ZA 1N2KA 1ANIA 2G9YA 3CMRA 3UN5A 1KHLA 1ELXA 3DYCA 3UO0A 1ELZA 1Y6VA 3BDGA 2IFYA 3IGZB 1ZEDA 3T01A 1KH7A 1EW8A 1URBA 1EQJA 1AJAA 1ALKA 1KHKA 1B8JA 3T00A 1ED8A 1ZEFA 1P49A 1FSUA 1AJCA 3BDHA 1O99A 1SHNA 3T02A 1URAA 3TX0A 3MK2A 1KH9A
chains in the KnotProt database with same CATH homology


 
#chains in the KnotProt database with same CATH superfamily
 2GLQ A;  1EJJ A;  3NVL A;  3IGY B;  3SZZ A;  3M8Y A;  2ANH A;  1SHQ A;  1O98 A;  1ELY A;  1E2S P;  3OT9 A;  3BDG B;  3DPC A;  1KH4 A;  3ED4 A;  1E3C P;  1EI6 A;  1EW2 A;  1AJB A;  1KHN A;  3SZY A;  1ALI A;  3TWZ A;  1HJK A;  1KH5 A;  3UN3 A;  1ZEB A;  1HQA A;  3UN2 A;  3M8W A;  1ALJ A;  2GA3 A;  4FDI A;  1AUK A;  3MK1 A;  1ED9 A;  3UNY A;  1E1Z P;  4FDJ A;  1EW9 A;  1Y7A A;  1N2L A;  1E33 P;  1KHJ A;  3BDF A;  3MK0 A;  1ANJ A;  3M7V A;  1K7H A;  2QZU A;  1HDH A;  1AJD A;  3M8Z A;  1N2K A;  1ANI A;  2G9Y A;  3CMR A;  3UN5 A;  1KHL A;  1ELX A;  3DYC A;  3UO0 A;  1ELZ A;  1Y6V A;  3BDG A;  2IFY A;  3IGZ B;  1ZED A;  3T01 A;  1KH7 A;  1EW8 A;  1URB A;  1EQJ A;  1AJA A;  1ALK A;  1KHK A;  1B8J A;  3T00 A;  1ED8 A;  1ZEF A;  1P49 A;  1FSU A;  1AJC A;  3BDH A;  1O99 A;  1SHN A;  3T02 A;  1URA A;  3TX0 A;  3MK2 A;  1KH9 A; 
#chains in the KnotProt database with same CATH topology
 2GLQ A;  1EJJ A;  3NVL A;  3IGY B;  3SZZ A;  3M8Y A;  2ANH A;  1SHQ A;  1O98 A;  1ELY A;  1E2S P;  3OT9 A;  3BDG B;  3DPC A;  1KH4 A;  3ED4 A;  1E3C P;  1EI6 A;  1EW2 A;  1AJB A;  1KHN A;  3SZY A;  1ALI A;  3TWZ A;  1HJK A;  1KH5 A;  3UN3 A;  1ZEB A;  1HQA A;  3UN2 A;  3M8W A;  1ALJ A;  2GA3 A;  4FDI A;  1AUK A;  3MK1 A;  1ED9 A;  3UNY A;  1E1Z P;  4FDJ A;  1EW9 A;  1Y7A A;  1N2L A;  1E33 P;  1KHJ A;  3BDF A;  3MK0 A;  1ANJ A;  3M7V A;  1K7H A;  2QZU A;  1HDH A;  1AJD A;  3M8Z A;  1N2K A;  1ANI A;  2G9Y A;  3CMR A;  3UN5 A;  1KHL A;  1ELX A;  3DYC A;  3UO0 A;  1ELZ A;  1Y6V A;  3BDG A;  2IFY A;  3IGZ B;  1ZED A;  3T01 A;  1KH7 A;  1EW8 A;  1URB A;  1EQJ A;  1AJA A;  1ALK A;  1KHK A;  1B8J A;  3T00 A;  1ED8 A;  1ZEF A;  1P49 A;  1FSU A;  1AJC A;  3BDH A;  1O99 A;  1SHN A;  3T02 A;  1URA A;  3TX0 A;  3MK2 A;  1KH9 A; 
#chains in the KnotProt database with same CATH homology
 2GLQ A;  1EJJ A;  3NVL A;  3IGY B;  3SZZ A;  3M8Y A;  2ANH A;  1SHQ A;  1O98 A;  1ELY A;  1E2S P;  3OT9 A;  3BDG B;  3DPC A;  1KH4 A;  3ED4 A;  1E3C P;  1EI6 A;  1EW2 A;  1AJB A;  1KHN A;  3SZY A;  1ALI A;  3TWZ A;  1HJK A;  1KH5 A;  3UN3 A;  1ZEB A;  1HQA A;  3UN2 A;  3M8W A;  1ALJ A;  2GA3 A;  4FDI A;  1AUK A;  3MK1 A;  1ED9 A;  3UNY A;  1E1Z P;  4FDJ A;  1EW9 A;  1Y7A A;  1N2L A;  1E33 P;  1KHJ A;  3BDF A;  3MK0 A;  1ANJ A;  3M7V A;  1K7H A;  2QZU A;  1HDH A;  1AJD A;  3M8Z A;  1N2K A;  1ANI A;  2G9Y A;  3CMR A;  3UN5 A;  1KHL A;  1ELX A;  3DYC A;  3UO0 A;  1ELZ A;  1Y6V A;  3BDG A;  2IFY A;  3IGZ B;  1ZED A;  3T01 A;  1KH7 A;  1EW8 A;  1URB A;  1EQJ A;  1AJA A;  1ALK A;  1KHK A;  1B8J A;  3T00 A;  1ED8 A;  1ZEF A;  1P49 A;  1FSU A;  1AJC A;  3BDH A;  1O99 A;  1SHN A;  3T02 A;  1URA A;  3TX0 A;  3MK2 A;  1KH9 A; 
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similar chains in the KnotProt database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the KnotProt database (?% sequence similarity)
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#similar chains, but unknotted
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